(23 nodes) (2011) Antiretroviral restriction factors. network (Callithrix jacchus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100386265	Histone domain-containing protein. (136 aa)
	ENSCJAP00000074198	Histone H3; Belongs to the histone H3 family. (124 aa)
	FEZ1	Fasciculation and elongation protein zeta 1. (394 aa)
	APOBEC3G-2	Uncharacterized protein. (59 aa)
	ENSCJAP00000065541	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC100385283	Histone H3; Belongs to the histone H3 family. (136 aa)
	ENSCJAP00000063804	Histone H3; Belongs to the histone H3 family. (135 aa)
	LOC100389168	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC100414113	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC100413207	Histone H3; Belongs to the histone H3 family. (135 aa)
	TRIM28	Tripartite motif containing 28. (835 aa)
	IFNG	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. (166 aa)
	LOC100394573	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC100394455	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC100398205	Histone H3; Belongs to the histone H3 family. (136 aa)
	APOBEC3G	Uncharacterized protein. (390 aa)
	DDB1	Damage specific DNA binding protein 1. (1140 aa)
	TCEB2	Transcription elongation factor B polypeptide 2 isoform a. (118 aa)
	MOV10	Mov10 RISC complex RNA helicase. (1003 aa)
	LOC100385831	Histone H3; Belongs to the histone H3 family. (135 aa)
	CUL5	Cullin-5; Belongs to the cullin family. (780 aa)
	APOB	Apolipoprotein B. (4557 aa)
	SAMHD1	SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (627 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOB	APOBEC3G	ENSCJAP00000014061	ENSCJAP00000041864	Apolipoprotein B.	Uncharacterized protein.	0.626
APOB	APOBEC3G-2	ENSCJAP00000014061	ENSCJAP00000069433	Apolipoprotein B.	Uncharacterized protein.	0.626
APOB	IFNG	ENSCJAP00000014061	ENSCJAP00000056963	Apolipoprotein B.	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.	0.413
APOB	SAMHD1	ENSCJAP00000014061	ENSCJAP00000002207	Apolipoprotein B.	SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1.	0.617
APOBEC3G	APOB	ENSCJAP00000041864	ENSCJAP00000014061	Uncharacterized protein.	Apolipoprotein B.	0.626
APOBEC3G	CUL5	ENSCJAP00000041864	ENSCJAP00000018606	Uncharacterized protein.	Cullin-5; Belongs to the cullin family.	0.974
APOBEC3G	DDB1	ENSCJAP00000041864	ENSCJAP00000035865	Uncharacterized protein.	Damage specific DNA binding protein 1.	0.433
APOBEC3G	IFNG	ENSCJAP00000041864	ENSCJAP00000056963	Uncharacterized protein.	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.	0.612
APOBEC3G	MOV10	ENSCJAP00000041864	ENSCJAP00000025111	Uncharacterized protein.	Mov10 RISC complex RNA helicase.	0.552
APOBEC3G	SAMHD1	ENSCJAP00000041864	ENSCJAP00000002207	Uncharacterized protein.	SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1.	0.899
APOBEC3G	TCEB2	ENSCJAP00000041864	ENSCJAP00000028261	Uncharacterized protein.	Transcription elongation factor B polypeptide 2 isoform a.	0.964
APOBEC3G-2	APOB	ENSCJAP00000069433	ENSCJAP00000014061	Uncharacterized protein.	Apolipoprotein B.	0.626
APOBEC3G-2	CUL5	ENSCJAP00000069433	ENSCJAP00000018606	Uncharacterized protein.	Cullin-5; Belongs to the cullin family.	0.974
APOBEC3G-2	DDB1	ENSCJAP00000069433	ENSCJAP00000035865	Uncharacterized protein.	Damage specific DNA binding protein 1.	0.433
APOBEC3G-2	IFNG	ENSCJAP00000069433	ENSCJAP00000056963	Uncharacterized protein.	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.	0.612
APOBEC3G-2	MOV10	ENSCJAP00000069433	ENSCJAP00000025111	Uncharacterized protein.	Mov10 RISC complex RNA helicase.	0.552
APOBEC3G-2	SAMHD1	ENSCJAP00000069433	ENSCJAP00000002207	Uncharacterized protein.	SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1.	0.899
APOBEC3G-2	TCEB2	ENSCJAP00000069433	ENSCJAP00000028261	Uncharacterized protein.	Transcription elongation factor B polypeptide 2 isoform a.	0.964
CUL5	APOBEC3G	ENSCJAP00000018606	ENSCJAP00000041864	Cullin-5; Belongs to the cullin family.	Uncharacterized protein.	0.974
CUL5	APOBEC3G-2	ENSCJAP00000018606	ENSCJAP00000069433	Cullin-5; Belongs to the cullin family.	Uncharacterized protein.	0.974