STRINGSTRING
TUB TUB SUMO3 SUMO3 GAPDHS GAPDHS F7EMI9_CALJA F7EMI9_CALJA LMNA LMNA ENSCJAP00000066250 ENSCJAP00000066250 ENSCJAP00000064616 ENSCJAP00000064616 SUMO2 SUMO2 SUMO1 SUMO1 ENSCJAP00000061564 ENSCJAP00000061564 ENSCJAP00000053284 ENSCJAP00000053284 LOC100398346 LOC100398346 F7H580_CALJA F7H580_CALJA F7IG57_CALJA F7IG57_CALJA BRCA1 BRCA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TUBTUB bipartite transcription factor; Belongs to the TUB family. (623 aa)
SUMO3Small ubiquitin-related modifier. (103 aa)
GAPDHSGlyceraldehyde-3-phosphate dehydrogenase. (408 aa)
F7EMI9_CALJAGlyceraldehyde-3-phosphate dehydrogenase. (335 aa)
LMNAUncharacterized protein; Belongs to the intermediate filament family. (677 aa)
ENSCJAP00000066250Glyceraldehyde-3-phosphate dehydrogenase. (357 aa)
ENSCJAP00000064616Glyceraldehyde-3-phosphate dehydrogenase. (328 aa)
SUMO2Small ubiquitin-related modifier. (95 aa)
SUMO1Small ubiquitin-related modifier. (106 aa)
ENSCJAP00000061564Small ubiquitin-related modifier. (101 aa)
ENSCJAP00000053284Glyceraldehyde-3-phosphate dehydrogenase. (332 aa)
LOC100398346RAD50 homolog isoform 1 (Predicted). (1312 aa)
F7H580_CALJAGlyceraldehyde-3-phosphate dehydrogenase. (319 aa)
F7IG57_CALJASmall ubiquitin-related modifier. (95 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1830 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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