STRINGSTRING
LOC100398205 LOC100398205 HOXB2 HOXB2 COL3A1 COL3A1 COL1A1 COL1A1 COL4A2 COL4A2 LOC100386265 LOC100386265 KLF4 KLF4 ENSCJAP00000074198 ENSCJAP00000074198 BGN BGN ENSCJAP00000065541 ENSCJAP00000065541 LOC100385283 LOC100385283 ENSCJAP00000063804 ENSCJAP00000063804 LOC100389168 LOC100389168 LOC100414113 LOC100414113 LOC100413207 LOC100413207 LOC100394573 LOC100394573 LOC100394455 LOC100394455 FOSL2 FOSL2 MSX2 MSX2 SPDEF SPDEF COL6A2 COL6A2 PRRX2 PRRX2 COL17A1 COL17A1 COL4A1 COL4A1 SNAI2 SNAI2 CD151 CD151 LOC100385831 LOC100385831 COL6A3 COL6A3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100398205Histone H3; Belongs to the histone H3 family. (136 aa)
HOXB2Homeobox protein Hox-B2. (356 aa)
COL3A1Collagen alpha-1(III) chain preproprotein. (1465 aa)
COL1A1Collagen alpha-1(I) chain preproprotein. (1464 aa)
COL4A2Collagen type IV alpha 2 chain. (1798 aa)
LOC100386265Histone domain-containing protein. (136 aa)
KLF4Kruppel like factor 4. (507 aa)
ENSCJAP00000074198Histone H3; Belongs to the histone H3 family. (124 aa)
BGNBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (447 aa)
ENSCJAP00000065541Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100385283Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCJAP00000063804Histone H3; Belongs to the histone H3 family. (135 aa)
LOC100389168Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100414113Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100413207Histone H3; Belongs to the histone H3 family. (135 aa)
LOC100394573Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100394455Histone H3; Belongs to the histone H3 family. (136 aa)
FOSL2FOS like 2, AP-1 transcription factor subunit. (326 aa)
MSX2Homeobox protein MSX-2. (267 aa)
SPDEFSAM pointed domain containing ETS transcription factor. (462 aa)
COL6A2Uncharacterized protein. (424 aa)
PRRX2Paired related homeobox 2. (253 aa)
COL17A1Collagen type XVII alpha 1 chain. (1426 aa)
COL4A1Collagen alpha-1(IV) chain preproprotein. (1669 aa)
SNAI2Snail family transcriptional repressor 2. (268 aa)
CD151Tetraspanin. (252 aa)
LOC100385831Histone H3; Belongs to the histone H3 family. (135 aa)
COL6A3Collagen type VI alpha 3 chain. (3176 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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