STRINGSTRING
SOD2 SOD2 GRIA1 GRIA1 CASP9 CASP9 NES NES GRM1 GRM1 GRM5 GRM5 CASP3 CASP3 MAP2 MAP2 BDNF BDNF BMP2 BMP2 CCL5 CCL5 HTT HTT POU5F1 POU5F1 ALDH1L1 ALDH1L1 FOXO4 FOXO4 TH TH FZD1 FZD1 GAD1 GAD1 BCL2 BCL2 CASP2 CASP2 CXCR1 CXCR1 PAX6 PAX6 PPARG PPARG SOX2 SOX2 GRIA2 GRIA2 BCL2L1 BCL2L1 LCN2 LCN2 POU5F1-2 POU5F1-2 APOE APOE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SOD2Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (318 aa)
GRIA1Glutamate ionotropic receptor AMPA type subunit 1. (915 aa)
CASP9Caspase 9; Belongs to the peptidase C14A family. (400 aa)
NESNestin; Belongs to the intermediate filament family. (1717 aa)
GRM1Metabotropic glutamate receptor 1 isoform alpha. (1194 aa)
GRM5Metabotropic glutamate receptor 5 isoform a. (1210 aa)
CASP3Caspase 3; Belongs to the peptidase C14A family. (284 aa)
MAP2Microtubule-associated protein. (1945 aa)
BDNFBrain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. (330 aa)
BMP2Bone morphogenetic protein 2. (401 aa)
CCL5C-C motif chemokine. (91 aa)
HTTHuntingtin. (3127 aa)
POU5F1POU-specific domain-containing protein. (484 aa)
ALDH1L1Aldehyde dehydrogenase 1 family member L1; Belongs to the aldehyde dehydrogenase family. (944 aa)
FOXO4Forkhead box O4. (508 aa)
THTyrosine hydroxylase. (623 aa)
FZD1Frizzled class receptor 1; Belongs to the G-protein coupled receptor Fz/Smo family. (580 aa)
GAD1Glutamate decarboxylase 1. (710 aa)
BCL2BCL2 apoptosis regulator. (240 aa)
CASP2Caspase-2 isoform 1 preproprotein; Belongs to the peptidase C14A family. (452 aa)
CXCR1C-X-C motif chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. (358 aa)
PAX6Paired box 6. (472 aa)
PPARGPeroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] (505 aa)
SOX2Transcription factor SOX-2. (319 aa)
GRIA2Glutamate ionotropic receptor AMPA type subunit 2. (883 aa)
BCL2L1Bcl-2-like protein 1 isoform 1. (233 aa)
LCN2Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (412 aa)
POU5F1-2Uncharacterized protein. (146 aa)
APOEApolipoprotein E. (320 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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