STRINGSTRING
DNA2 DNA2 GEN1 GEN1 BCCIP BCCIP APEX1 APEX1 EEPD1 EEPD1 RAD52 RAD52 MUS81 MUS81 BRCA2 BRCA2 EXO1 EXO1 XRCC3 XRCC3 EME2 EME2 BRCA1 BRCA1 WRN WRN EME1 EME1 MSH3 MSH3 SLX4 SLX4 RMI1 RMI1 LOC100398346 LOC100398346 RAD51B RAD51B RAD51D RAD51D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DNA2DNA replication helicase/nuclease 2. (987 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (909 aa)
BCCIPBRCA2 and CDKN1A-interacting protein; May promote cell cycle arrest by enhancing the inhibition of CDK2 activity by CDKN1A. May be required for repair of DNA damage by homologous recombination in conjunction with BRCA2. May not be involved in non-homologous end joining (NHEJ); Belongs to the BCP1 family. (314 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
EEPD1Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (565 aa)
RAD52RAD52 homolog, DNA repair protein. (419 aa)
MUS81MUS81 structure-specific endonuclease subunit. (551 aa)
BRCA2BRCA2 DNA repair associated. (3409 aa)
EXO1Exonuclease 1. (852 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (346 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (372 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1830 aa)
WRNWRN RecQ like helicase. (1433 aa)
EME1Essential meiotic structure-specific endonuclease 1. (584 aa)
MSH3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1124 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1830 aa)
RMI1RecQ-mediated genome instability protein 1. (625 aa)
LOC100398346RAD50 homolog isoform 1 (Predicted). (1312 aa)
RAD51BRAD51 paralog B. (383 aa)
RAD51DDNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily. (328 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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