STRINGSTRING
SMAD2 SMAD2 SMAD3 SMAD3 BMP5 BMP5 BGN BGN LOX LOX SFRP2 SFRP2 PTPRC PTPRC TGFB1 TGFB1 ENTPD4 ENTPD4 DCN DCN CHRD CHRD TGFB2 TGFB2 GLIS3 GLIS3 CASP3 CASP3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAD2Mothers against decapentaplegic homolog. (494 aa)
SMAD3Mothers against decapentaplegic homolog. (437 aa)
BMP5Bone morphogenetic protein 5. (472 aa)
BGNBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (447 aa)
LOXLysyl oxidase. (417 aa)
SFRP2Secreted frizzled related protein 2. (538 aa)
PTPRCProtein tyrosine phosphatase receptor type C. (1252 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
ENTPD4Uncharacterized protein. (874 aa)
DCNDecorin; May affect the rate of fibrils formation. (361 aa)
CHRDChordin; Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes. (967 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
GLIS3GLIS family zinc finger 3. (931 aa)
CASP3Caspase 3; Belongs to the peptidase C14A family. (284 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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