(31 nodes) (2022) Advances in HIV-1 Assembly. network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CD81	Tetraspanin. (237 aa)
	AMOT	Angiomotin. (1084 aa)
	EIF4E	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (245 aa)
	CD86	Ig-like domain-containing protein. (361 aa)
	FURIN	Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. (795 aa)
	CASP1	Uncharacterized protein; Belongs to the peptidase C14A family. (426 aa)
	IQGAP1	IQ motif containing GTPase activating protein 1. (1657 aa)
	IPPK	Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate). (491 aa)
	SIGLEC1	Sialic acid binding Ig like lectin 1. (1710 aa)
	VPS28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (226 aa)
	APOBEC3G	Uncharacterized protein. (390 aa)
	CD44	CD44 molecule (Indian blood group). (703 aa)
	CD4	Ig-like domain-containing protein. (457 aa)
	SERINC3	Serine incorporator 3. (473 aa)
	NXF1	Nuclear RNA export factor 1 isoform 1. (619 aa)
	MARCHF8	Membrane associated ring-CH-type finger 8. (579 aa)
	MVB12A	Multivesicular body subunit 12A. (273 aa)
	VPS37B	Vacuolar protein sorting-associated protein 37B. (285 aa)
	ARF6	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	TSG101	Uncharacterized protein. (840 aa)
	IFNG	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. (166 aa)
	RAB14	Ras-related protein Rab-14. (215 aa)
	NXT1	Nuclear transport factor 2 like export factor 1. (140 aa)
	NEDD4L	NEDD4 like E3 ubiquitin protein ligase. (1254 aa)
	NEDD4	NEDD4 E3 ubiquitin protein ligase. (1319 aa)
	TFRC	Transferrin receptor protein 1. (760 aa)
	APOBEC3G-2	Uncharacterized protein. (59 aa)
	VPS35	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (804 aa)
	EGFR	Receptor protein-tyrosine kinase. (1210 aa)
	LOC100405150	GB1/RHD3-type G domain-containing protein. (605 aa)
	MARCHF1	Membrane associated ring-CH-type finger 1. (545 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMOT	MVB12A	ENSCJAP00000013045	ENSCJAP00000053911	Angiomotin.	Multivesicular body subunit 12A.	0.499
AMOT	NEDD4	ENSCJAP00000013045	ENSCJAP00000066364	Angiomotin.	NEDD4 E3 ubiquitin protein ligase.	0.713
AMOT	NEDD4L	ENSCJAP00000013045	ENSCJAP00000066326	Angiomotin.	NEDD4 like E3 ubiquitin protein ligase.	0.947
AMOT	TSG101	ENSCJAP00000013045	ENSCJAP00000056503	Angiomotin.	Uncharacterized protein.	0.463
AMOT	VPS37B	ENSCJAP00000013045	ENSCJAP00000054111	Angiomotin.	Vacuolar protein sorting-associated protein 37B.	0.420
APOBEC3G	CD4	ENSCJAP00000041864	ENSCJAP00000043597	Uncharacterized protein.	Ig-like domain-containing protein.	0.738
APOBEC3G	IFNG	ENSCJAP00000041864	ENSCJAP00000056963	Uncharacterized protein.	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.	0.612
APOBEC3G	SERINC3	ENSCJAP00000041864	ENSCJAP00000044612	Uncharacterized protein.	Serine incorporator 3.	0.590
APOBEC3G	TSG101	ENSCJAP00000041864	ENSCJAP00000056503	Uncharacterized protein.	Uncharacterized protein.	0.601
APOBEC3G-2	CD4	ENSCJAP00000069433	ENSCJAP00000043597	Uncharacterized protein.	Ig-like domain-containing protein.	0.739
APOBEC3G-2	IFNG	ENSCJAP00000069433	ENSCJAP00000056963	Uncharacterized protein.	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.	0.612
APOBEC3G-2	SERINC3	ENSCJAP00000069433	ENSCJAP00000044612	Uncharacterized protein.	Serine incorporator 3.	0.590
APOBEC3G-2	TSG101	ENSCJAP00000069433	ENSCJAP00000056503	Uncharacterized protein.	Uncharacterized protein.	0.601
ARF6	CD81	ENSCJAP00000056084	ENSCJAP00000001131	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Tetraspanin.	0.586
ARF6	IQGAP1	ENSCJAP00000056084	ENSCJAP00000018367	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	IQ motif containing GTPase activating protein 1.	0.550
ARF6	RAB14	ENSCJAP00000056084	ENSCJAP00000057842	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-14.	0.475
ARF6	TFRC	ENSCJAP00000056084	ENSCJAP00000067929	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Transferrin receptor protein 1.	0.489
ARF6	TSG101	ENSCJAP00000056084	ENSCJAP00000056503	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.537
CASP1	CD4	ENSCJAP00000018093	ENSCJAP00000043597	Uncharacterized protein; Belongs to the peptidase C14A family.	Ig-like domain-containing protein.	0.617
CASP1	IFNG	ENSCJAP00000018093	ENSCJAP00000056963	Uncharacterized protein; Belongs to the peptidase C14A family.	Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.	0.711