STRINGSTRING
LEF1 LEF1 BMP4 BMP4 PXDN PXDN BMP2 BMP2 ALB ALB TGFB1 TGFB1 SOX2 SOX2 NOG NOG WNT5A WNT5A TGFB2 TGFB2 PXDNL PXDNL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LEF1Lymphoid enhancer binding factor 1. (419 aa)
BMP4Bone morphogenetic protein 4 preproprotein. (408 aa)
PXDNUncharacterized protein. (691 aa)
BMP2Bone morphogenetic protein 2. (401 aa)
ALBAlbumin. (608 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
SOX2Transcription factor SOX-2. (319 aa)
NOGNoggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite. (232 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
PXDNLPeroxidasin like. (1457 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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