(10 nodes) Seh1-associated complex network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RRAGA	Uncharacterized protein. (313 aa)
	NPRL2	NPR2 like, GATOR1 complex subunit. (383 aa)
	SEC13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (368 aa)
	WDR59	WD repeat domain 59. (974 aa)
	LOC108283266	DEP domain-containing protein. (1576 aa)
	ENSCCAP00000027253	Uncharacterized protein. (75 aa)
	SEH1L	SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (422 aa)
	MIOS	Meiosis regulator for oocyte development. (875 aa)
	NPRL3	NPR3 like, GATOR1 complex subunit. (582 aa)
	WDR24	WD repeat domain 24. (913 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCCAP00000027253	LOC108283266	ENSCCAP00000027253	ENSCCAP00000021223	Uncharacterized protein.	DEP domain-containing protein.	0.994
ENSCCAP00000027253	MIOS	ENSCCAP00000027253	ENSCCAP00000030385	Uncharacterized protein.	Meiosis regulator for oocyte development.	0.989
ENSCCAP00000027253	NPRL2	ENSCCAP00000027253	ENSCCAP00000002645	Uncharacterized protein.	NPR2 like, GATOR1 complex subunit.	0.995
ENSCCAP00000027253	RRAGA	ENSCCAP00000027253	ENSCCAP00000000129	Uncharacterized protein.	Uncharacterized protein.	0.969
ENSCCAP00000027253	SEC13	ENSCCAP00000027253	ENSCCAP00000017819	Uncharacterized protein.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.976
ENSCCAP00000027253	SEH1L	ENSCCAP00000027253	ENSCCAP00000027900	Uncharacterized protein.	SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.	0.985
ENSCCAP00000027253	WDR24	ENSCCAP00000027253	ENSCCAP00000038178	Uncharacterized protein.	WD repeat domain 24.	0.988
ENSCCAP00000027253	WDR59	ENSCCAP00000027253	ENSCCAP00000019704	Uncharacterized protein.	WD repeat domain 59.	0.990
LOC108283266	ENSCCAP00000027253	ENSCCAP00000021223	ENSCCAP00000027253	DEP domain-containing protein.	Uncharacterized protein.	0.994
LOC108283266	MIOS	ENSCCAP00000021223	ENSCCAP00000030385	DEP domain-containing protein.	Meiosis regulator for oocyte development.	0.999
LOC108283266	NPRL2	ENSCCAP00000021223	ENSCCAP00000002645	DEP domain-containing protein.	NPR2 like, GATOR1 complex subunit.	0.999
LOC108283266	NPRL3	ENSCCAP00000021223	ENSCCAP00000035193	DEP domain-containing protein.	NPR3 like, GATOR1 complex subunit.	0.996
LOC108283266	RRAGA	ENSCCAP00000021223	ENSCCAP00000000129	DEP domain-containing protein.	Uncharacterized protein.	0.983
LOC108283266	SEC13	ENSCCAP00000021223	ENSCCAP00000017819	DEP domain-containing protein.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.997
LOC108283266	SEH1L	ENSCCAP00000021223	ENSCCAP00000027900	DEP domain-containing protein.	SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.	0.997
LOC108283266	WDR24	ENSCCAP00000021223	ENSCCAP00000038178	DEP domain-containing protein.	WD repeat domain 24.	0.998
LOC108283266	WDR59	ENSCCAP00000021223	ENSCCAP00000019704	DEP domain-containing protein.	WD repeat domain 59.	0.999
MIOS	ENSCCAP00000027253	ENSCCAP00000030385	ENSCCAP00000027253	Meiosis regulator for oocyte development.	Uncharacterized protein.	0.989
MIOS	LOC108283266	ENSCCAP00000030385	ENSCCAP00000021223	Meiosis regulator for oocyte development.	DEP domain-containing protein.	0.999
MIOS	NPRL2	ENSCCAP00000030385	ENSCCAP00000002645	Meiosis regulator for oocyte development.	NPR2 like, GATOR1 complex subunit.	0.999