(10 nodes) Mixed, incl. Intimal thickness related receptor, IRP, and Myeloid progenitor cell differentiation network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108298872	GpcrRhopsn4 domain-containing protein. (373 aa)
	CDCA7L	Cell division cycle associated 7 like. (452 aa)
	CCDC57	Coiled-coil domain containing 57. (916 aa)
	ENSCCAP00000010320	Uncharacterized protein. (666 aa)
	SP3	Uncharacterized protein. (780 aa)
	ENSCCAP00000014759	Uncharacterized protein. (385 aa)
	GPR180	GpcrRhopsn4 domain-containing protein. (439 aa)
	TMEM196	Transmembrane protein 196. (179 aa)
	SP4	Sp4 transcription factor. (784 aa)
	SLC16A11	Solute carrier family 16 member 11. (471 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC57	ENSCCAP00000010320	ENSCCAP00000008765	ENSCCAP00000010320	Coiled-coil domain containing 57.	Uncharacterized protein.	0.495
CCDC57	SLC16A11	ENSCCAP00000008765	ENSCCAP00000030365	Coiled-coil domain containing 57.	Solute carrier family 16 member 11.	0.658
CCDC57	SP3	ENSCCAP00000008765	ENSCCAP00000013109	Coiled-coil domain containing 57.	Uncharacterized protein.	0.495
CDCA7L	SP4	ENSCCAP00000006958	ENSCCAP00000025404	Cell division cycle associated 7 like.	Sp4 transcription factor.	0.456
CDCA7L	TMEM196	ENSCCAP00000006958	ENSCCAP00000024799	Cell division cycle associated 7 like.	Transmembrane protein 196.	0.495
ENSCCAP00000010320	CCDC57	ENSCCAP00000010320	ENSCCAP00000008765	Uncharacterized protein.	Coiled-coil domain containing 57.	0.495
SLC16A11	CCDC57	ENSCCAP00000030365	ENSCCAP00000008765	Solute carrier family 16 member 11.	Coiled-coil domain containing 57.	0.658
SP3	CCDC57	ENSCCAP00000013109	ENSCCAP00000008765	Uncharacterized protein.	Coiled-coil domain containing 57.	0.495
SP4	CDCA7L	ENSCCAP00000025404	ENSCCAP00000006958	Sp4 transcription factor.	Cell division cycle associated 7 like.	0.456
SP4	TMEM196	ENSCCAP00000025404	ENSCCAP00000024799	Sp4 transcription factor.	Transmembrane protein 196.	0.566
TMEM196	CDCA7L	ENSCCAP00000024799	ENSCCAP00000006958	Transmembrane protein 196.	Cell division cycle associated 7 like.	0.495
TMEM196	SP4	ENSCCAP00000024799	ENSCCAP00000025404	Transmembrane protein 196.	Sp4 transcription factor.	0.566