STRINGSTRING
ENSCCAP00000000291 ENSCCAP00000000291 ENSCCAP00000000379 ENSCCAP00000000379 CINP CINP GTF2E2 GTF2E2 TCEA1 TCEA1 TAF13 TAF13 POLR2K POLR2K TAF8 TAF8 TAF4 TAF4 ERCC2 ERCC2 GTF2F2 GTF2F2 C6orf15 C6orf15 POLR2A POLR2A GTF2H4 GTF2H4 POLR2I POLR2I CTDP1 CTDP1 LOC108299500 LOC108299500 TAF6 TAF6 EZHIP EZHIP TAF2 TAF2 ERCC3 ERCC3 SIDT1 SIDT1 GTF2B GTF2B SRBD1 SRBD1 POLR2E POLR2E POLR2B POLR2B GTF2A1L GTF2A1L TBP TBP GTF2E1 GTF2E1 TAF5 TAF5 LEO1 LEO1 EEPD1 EEPD1 ENSCCAP00000017342 ENSCCAP00000017342 TAF9B TAF9B TAF11 TAF11 TAF5L TAF5L TAF1 TAF1 GTF2A2 GTF2A2 RTF1 RTF1 ENSCCAP00000019805 ENSCCAP00000019805 SIDT2 SIDT2 GTF2H1 GTF2H1 TCEA3 TCEA3 POLR2J POLR2J CDC73 CDC73 SSRP1 SSRP1 CDK7 CDK7 ENSCCAP00000024134 ENSCCAP00000024134 LOC108293639 LOC108293639 GTF2H5 GTF2H5 ENSCCAP00000026918 ENSCCAP00000026918 SUPT6H SUPT6H PAF1 PAF1 GTF2H2 GTF2H2 CCNH CCNH LOC108307710 LOC108307710 CDK20 CDK20 TCEA2 TCEA2 LOC108310878 LOC108310878 GTF2H3 GTF2H3 ENSCCAP00000030858 ENSCCAP00000030858 TAF4B TAF4B ELOF1 ELOF1 SUPT16H SUPT16H IWS1 IWS1 PRR30 PRR30 GTF2A1 GTF2A1 C11orf88 C11orf88 MNAT1 MNAT1 TAF10 TAF10 SUPT5H SUPT5H ENSCCAP00000032998 ENSCCAP00000032998 SUPT4H1 SUPT4H1 POLR2H POLR2H POLR2L POLR2L TAF3 TAF3 POLR2C POLR2C UPK3BL2 UPK3BL2 POLR2F POLR2F TAF7L TAF7L TAF6L TAF6L GTF2F1 GTF2F1 TAF12 TAF12 POLR2D POLR2D CTR9 CTR9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCCAP00000000291Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (91 aa)
ENSCCAP00000000379Uncharacterized protein. (57 aa)
CINPCyclin dependent kinase 2 interacting protein. (217 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
TCEA1Transcription elongation factor A1. (262 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
TAF8TATA-box binding protein associated factor 8. (312 aa)
TAF4TATA-box binding protein associated factor 4. (712 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (770 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
C6orf15Chromosome 6 open reading frame 15. (303 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CTDP1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (964 aa)
LOC108299500Uncharacterized protein. (246 aa)
TAF6TATA-box binding protein associated factor 6. (713 aa)
EZHIPEZH inhibitory protein. (478 aa)
TAF2TATA-box binding protein associated factor 2. (1199 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
SIDT1SID1 transmembrane family member 1. (827 aa)
GTF2BGeneral transcription factor IIB. (316 aa)
SRBD1S1 RNA binding domain 1. (994 aa)
POLR2ERNA polymerase II subunit E. (227 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (477 aa)
TBPTATA-box binding protein. (329 aa)
GTF2E1General transcription factor IIE subunit 1. (342 aa)
TAF5TATA-box binding protein associated factor 5. (800 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
EEPD1Endonuclease/exonuclease/phosphatase family domain containing 1. (569 aa)
ENSCCAP00000017342TFIIA_gamma_N domain-containing protein. (81 aa)
TAF9BTATA-box binding protein associated factor 9b. (251 aa)
TAF11TATA-box binding protein associated factor 11. (211 aa)
TAF5LTATA-box binding protein associated factor 5 like. (519 aa)
TAF1Transcription initiation factor TFIID subunit. (1927 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (643 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
SIDT2SID1 transmembrane family member 2. (861 aa)
GTF2H1General transcription factor IIH subunit 1. (555 aa)
TCEA3Transcription elongation factor A3. (348 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (185 aa)
CDC73Cell division cycle 73. (531 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (708 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
ENSCCAP00000024134Uncharacterized protein. (120 aa)
LOC108293639Uncharacterized protein. (289 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
ENSCCAP00000026918Uncharacterized protein. (262 aa)
SUPT6HTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (529 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CDK20Cyclin dependent kinase 20; Belongs to the protein kinase superfamily. (346 aa)
TCEA2Transcription elongation factor A2. (299 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
GTF2H3General transcription factor IIH subunit 3. (287 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
TAF4BTATA-box binding protein associated factor 4b. (861 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (120 aa)
SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit. (905 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (819 aa)
PRR30Uncharacterized protein. (306 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
C11orf88Chromosome 11 open reading frame 88. (195 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
ENSCCAP00000032998General transcription factor IIH subunit. (384 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
TAF3TATA-box binding protein associated factor 3. (931 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
UPK3BL2Uncharacterized protein. (266 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
TAF7LTATA-box binding protein associated factor 7 like. (463 aa)
TAF6LTATA-box binding protein associated factor 6 like. (622 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
TAF12TATA-box binding protein associated factor 12. (213 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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