STRINGSTRING
TAF8 TAF8 MED28 MED28 ENSCCAP00000000187 ENSCCAP00000000187 ENSCCAP00000000291 ENSCCAP00000000291 ENSCCAP00000000829 ENSCCAP00000000829 LOC108293510 LOC108293510 ELOB ELOB MED18 MED18 ENSCCAP00000002812 ENSCCAP00000002812 GTF2E2 GTF2E2 ENSCCAP00000003201 ENSCCAP00000003201 TAF13 TAF13 MED11-2 MED11-2 ENSCCAP00000004889 ENSCCAP00000004889 MED11 MED11 TAF4 TAF4 MED23 MED23 GTF2F2 GTF2F2 E2F2 E2F2 MED19 MED19 MED11-3 MED11-3 POLR2I POLR2I MED16 MED16 LOC108299500 LOC108299500 TAF6 TAF6 ELOC ELOC ENSCCAP00000011631 ENSCCAP00000011631 MED29 MED29 ENSCCAP00000012294 ENSCCAP00000012294 TAF2 TAF2 ENSCCAP00000013232 ENSCCAP00000013232 ERCC3 ERCC3 PPARGC1A PPARGC1A LOC108297026 LOC108297026 GTF2B GTF2B ENSCCAP00000015709 ENSCCAP00000015709 GTF2A1L GTF2A1L TBP TBP GTF2E1 GTF2E1 TAF5 TAF5 ENSCCAP00000017342 ENSCCAP00000017342 MED9 MED9 ENSCCAP00000018591 ENSCCAP00000018591 TAF11 TAF11 TAF1 TAF1 GTF2A2 GTF2A2 LOC108311445 LOC108311445 ENSCCAP00000019805 ENSCCAP00000019805 ENSCCAP00000019951 ENSCCAP00000019951 E2F3 E2F3 LOC108297016 LOC108297016 MED14 MED14 CDK7 CDK7 ENSCCAP00000024134 ENSCCAP00000024134 DR1 DR1 GTF2H5 GTF2H5 MED25 MED25 MED8 MED8 CCNH CCNH LOC108307710 LOC108307710 MED7 MED7 MED21 MED21 MED22 MED22 LOC108310878 LOC108310878 MED24 MED24 MED30 MED30 ENSCCAP00000030858 ENSCCAP00000030858 TAF4B TAF4B ENSCCAP00000031590 ENSCCAP00000031590 GTF2A1 GTF2A1 TAF10 TAF10 CDK9 CDK9 TAF3 TAF3 TAF7L TAF7L TAF6L TAF6L MED27 MED27 MED15 MED15 ELOA ELOA MED26 MED26 GTF2F1 GTF2F1 TAF12 TAF12 MAZ MAZ MED4 MED4 POLR2D POLR2D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF8TATA-box binding protein associated factor 8. (312 aa)
MED28Uncharacterized protein. (178 aa)
ENSCCAP00000000187Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
ENSCCAP00000000291Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (91 aa)
ENSCCAP00000000829Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
LOC108293510Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
ELOBElongin B. (157 aa)
MED18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (208 aa)
ENSCCAP00000002812Uncharacterized protein. (154 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
ENSCCAP00000003201Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
MED11-2Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (87 aa)
ENSCCAP00000004889Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
MED11Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (117 aa)
TAF4TATA-box binding protein associated factor 4. (712 aa)
MED23Mediator complex subunit 23. (1349 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
E2F2E2F transcription factor 2. (435 aa)
MED19Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (261 aa)
MED11-3Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (79 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
MED16Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (860 aa)
LOC108299500Uncharacterized protein. (246 aa)
TAF6TATA-box binding protein associated factor 6. (713 aa)
ELOCElongin C. (112 aa)
ENSCCAP00000011631C2H2-type domain-containing protein. (214 aa)
MED29Mediator complex subunit 29. (200 aa)
ENSCCAP00000012294Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (107 aa)
TAF2TATA-box binding protein associated factor 2. (1199 aa)
ENSCCAP00000013232Uncharacterized protein. (264 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
PPARGC1APPARG coactivator 1 alpha. (812 aa)
LOC108297026Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)
GTF2BGeneral transcription factor IIB. (316 aa)
ENSCCAP00000015709Uncharacterized protein. (643 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (477 aa)
TBPTATA-box binding protein. (329 aa)
GTF2E1General transcription factor IIE subunit 1. (342 aa)
TAF5TATA-box binding protein associated factor 5. (800 aa)
ENSCCAP00000017342TFIIA_gamma_N domain-containing protein. (81 aa)
MED9Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (147 aa)
ENSCCAP00000018591Uncharacterized protein. (164 aa)
TAF11TATA-box binding protein associated factor 11. (211 aa)
TAF1Transcription initiation factor TFIID subunit. (1927 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
LOC108311445Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (131 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
ENSCCAP00000019951Uncharacterized protein. (225 aa)
E2F3E2F transcription factor 3. (461 aa)
LOC108297016Mediator complex subunit 27. (160 aa)
MED14Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1418 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
ENSCCAP00000024134Uncharacterized protein. (120 aa)
DR1Down-regulator of transcription 1. (176 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
MED25Uncharacterized protein. (796 aa)
MED8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (293 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
MED7Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (233 aa)
MED21Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (158 aa)
MED22Mediator complex subunit 22. (130 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
MED24Mediator complex subunit 24. (1008 aa)
MED30Mediator complex subunit 30. (178 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
TAF4BTATA-box binding protein associated factor 4b. (861 aa)
ENSCCAP00000031590TFIIS N-terminal domain-containing protein. (499 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
CDK9Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (372 aa)
TAF3TATA-box binding protein associated factor 3. (931 aa)
TAF7LTATA-box binding protein associated factor 7 like. (463 aa)
TAF6LTATA-box binding protein associated factor 6 like. (622 aa)
MED27Uncharacterized protein. (173 aa)
MED15Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (783 aa)
ELOAElongin A. (789 aa)
MED26TFIIS N-terminal domain-containing protein. (600 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
TAF12TATA-box binding protein associated factor 12. (213 aa)
MAZMYC associated zinc finger protein. (493 aa)
MED4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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