STRINGSTRING
PAF1 PAF1 SUPT6H SUPT6H WDR61 WDR61 CDC73 CDC73 SETD2 SETD2 TCEA3 TCEA3 CDK12 CDK12 RTF1 RTF1 ADRM1 ADRM1 LOC108307710 LOC108307710 TCEA2 TCEA2 LOC108310878 LOC108310878 LEO1 LEO1 LOC108297026 LOC108297026 ELP4 ELP4 ENY2 ENY2 CTDP1 CTDP1 POLR2I POLR2I ELL2 ELL2 GTF2F2 GTF2F2 ENY2-2 ENY2-2 ENSCCAP00000005168 ENSCCAP00000005168 TCEA1 TCEA1 ELL ELL CDK13 CDK13 ELP2 ELP2 ELOF1 ELOF1 SUPT16H SUPT16H ENSCCAP00000031590 ENSCCAP00000031590 SUPT5H SUPT5H CDK9 CDK9 SUPT4H1 SUPT4H1 PCID2 PCID2 ELL3 ELL3 ELOB ELOB CTR9 CTR9 SOX10 SOX10 ELOA ELOA GTF2F1 GTF2F1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (529 aa)
SUPT6HTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
WDR61WD repeat domain 61. (305 aa)
CDC73Cell division cycle 73. (531 aa)
SETD2SET domain containing 2, histone lysine methyltransferase. (2485 aa)
TCEA3Transcription elongation factor A3. (348 aa)
CDK12Cyclin dependent kinase 12. (1423 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (643 aa)
ADRM1Adhesion regulating molecule 1. (407 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
TCEA2Transcription elongation factor A2. (299 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
LOC108297026Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)
ELP4Elongator acetyltransferase complex subunit 4. (476 aa)
ENY2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] (101 aa)
CTDP1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (964 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
ELL2Elongation factor for RNA polymerase II 2. (640 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
ENY2-2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] (89 aa)
ENSCCAP00000005168Uncharacterized protein. (98 aa)
TCEA1Transcription elongation factor A1. (262 aa)
ELLElongation factor for RNA polymerase II. (621 aa)
CDK13Cyclin dependent kinase 13. (1512 aa)
ELP2Elongator acetyltransferase complex subunit 2. (826 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (120 aa)
SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit. (905 aa)
ENSCCAP00000031590TFIIS N-terminal domain-containing protein. (499 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
CDK9Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (372 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
PCID2PCI domain containing 2. (443 aa)
ELL3Elongation factor for RNA polymerase II 3. (432 aa)
ELOBElongin B. (157 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
SOX10SRY-box transcription factor 10. (468 aa)
ELOAElongin A. (789 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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