(12 nodes) T cell chemotaxis network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TNFSF14	TNF superfamily member 14. (240 aa)
	CXCL12	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family. (119 aa)
	PIK3CD	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1056 aa)
	CXCL11	C-X-C motif chemokine. (94 aa)
	CCL26	C-C motif chemokine ligand 26. (93 aa)
	CXCL16	C-X-C motif chemokine ligand 16. (253 aa)
	CXCL10	C-X-C motif chemokine. (96 aa)
	LOC108293848	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (854 aa)
	PLEC	Plectin. (4683 aa)
	PIK3CG	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1102 aa)
	CXCR3	C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family. (377 aa)
	SLC12A2	Solute carrier family 12 member 2. (1209 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCL26	CXCL10	ENSCCAP00000017532	ENSCCAP00000023782	C-C motif chemokine ligand 26.	C-X-C motif chemokine.	0.944
CCL26	CXCL11	ENSCCAP00000017532	ENSCCAP00000012894	C-C motif chemokine ligand 26.	C-X-C motif chemokine.	0.671
CCL26	CXCL12	ENSCCAP00000017532	ENSCCAP00000006844	C-C motif chemokine ligand 26.	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	0.927
CCL26	CXCR3	ENSCCAP00000017532	ENSCCAP00000038964	C-C motif chemokine ligand 26.	C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.831
CXCL10	CCL26	ENSCCAP00000023782	ENSCCAP00000017532	C-X-C motif chemokine.	C-C motif chemokine ligand 26.	0.944
CXCL10	CXCL11	ENSCCAP00000023782	ENSCCAP00000012894	C-X-C motif chemokine.	C-X-C motif chemokine.	0.977
CXCL10	CXCL12	ENSCCAP00000023782	ENSCCAP00000006844	C-X-C motif chemokine.	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	0.979
CXCL10	CXCL16	ENSCCAP00000023782	ENSCCAP00000019791	C-X-C motif chemokine.	C-X-C motif chemokine ligand 16.	0.697
CXCL10	CXCR3	ENSCCAP00000023782	ENSCCAP00000038964	C-X-C motif chemokine.	C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.998
CXCL11	CCL26	ENSCCAP00000012894	ENSCCAP00000017532	C-X-C motif chemokine.	C-C motif chemokine ligand 26.	0.671
CXCL11	CXCL10	ENSCCAP00000012894	ENSCCAP00000023782	C-X-C motif chemokine.	C-X-C motif chemokine.	0.977
CXCL11	CXCL12	ENSCCAP00000012894	ENSCCAP00000006844	C-X-C motif chemokine.	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	0.888
CXCL11	CXCL16	ENSCCAP00000012894	ENSCCAP00000019791	C-X-C motif chemokine.	C-X-C motif chemokine ligand 16.	0.526
CXCL11	CXCR3	ENSCCAP00000012894	ENSCCAP00000038964	C-X-C motif chemokine.	C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.989
CXCL12	CCL26	ENSCCAP00000006844	ENSCCAP00000017532	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	C-C motif chemokine ligand 26.	0.927
CXCL12	CXCL10	ENSCCAP00000006844	ENSCCAP00000023782	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	C-X-C motif chemokine.	0.979
CXCL12	CXCL11	ENSCCAP00000006844	ENSCCAP00000012894	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	C-X-C motif chemokine.	0.888
CXCL12	CXCL16	ENSCCAP00000006844	ENSCCAP00000019791	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	C-X-C motif chemokine ligand 16.	0.613
CXCL12	CXCR3	ENSCCAP00000006844	ENSCCAP00000038964	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.901
CXCL16	CXCL10	ENSCCAP00000019791	ENSCCAP00000023782	C-X-C motif chemokine ligand 16.	C-X-C motif chemokine.	0.697