(6 nodes) Regulation of somitogenesis network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DLL1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (723 aa)
	DMRT2	Doublesex and mab-3 related transcription factor 2. (562 aa)
	CDX2	Caudal type homeobox 2. (311 aa)
	LFNG	Beta-1,3-N-acetylglucosaminyltransferase. (381 aa)
	CDX1	Caudal type homeobox 1. (265 aa)
	NOTCH1	Notch receptor 1. (2550 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLL1	LFNG	ENSCCAP00000008829	ENSCCAP00000017949	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Beta-1,3-N-acetylglucosaminyltransferase.	0.601
DLL1	NOTCH1	ENSCCAP00000008829	ENSCCAP00000033380	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 1.	0.985
LFNG	DLL1	ENSCCAP00000017949	ENSCCAP00000008829	Beta-1,3-N-acetylglucosaminyltransferase.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.601
LFNG	NOTCH1	ENSCCAP00000017949	ENSCCAP00000033380	Beta-1,3-N-acetylglucosaminyltransferase.	Notch receptor 1.	0.920
NOTCH1	DLL1	ENSCCAP00000033380	ENSCCAP00000008829	Notch receptor 1.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.985
NOTCH1	LFNG	ENSCCAP00000033380	ENSCCAP00000017949	Notch receptor 1.	Beta-1,3-N-acetylglucosaminyltransferase.	0.920