STRINGSTRING
TRIM63 TRIM63 RPS6KB1 RPS6KB1 SGCA SGCA FBXO32 FBXO32 SCN5A SCN5A NOL3 NOL3 LOC108294424 LOC108294424 DMD DMD HDAC4 HDAC4 SELENON SELENON ACTN3 ACTN3 PRKAG3 PRKAG3 DAG1 DAG1 CASQ1 CASQ1 MYOG MYOG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TRIM63Tripartite motif containing 63. (381 aa)
RPS6KB1Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (525 aa)
SGCASarcoglycan alpha. (387 aa)
FBXO32F-box protein 32. (355 aa)
SCN5ASodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (2016 aa)
NOL3Nucleolar protein 3. (258 aa)
LOC108294424EF-hand domain-containing protein. (488 aa)
DMDDystrophin. (3686 aa)
HDAC4Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1087 aa)
SELENONEF-hand domain-containing protein. (561 aa)
ACTN3Actinin alpha 3 (gene/pseudogene). (936 aa)
PRKAG3Protein kinase AMP-activated non-catalytic subunit gamma 3. (487 aa)
DAG1Dystroglycan 1. (895 aa)
CASQ1Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (398 aa)
MYOGMyogenin. (249 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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