STRINGSTRING
LEO1 LEO1 ENSCCAP00000017342 ENSCCAP00000017342 TAF9B TAF9B TAF11 TAF11 TAF5L TAF5L TAF1 TAF1 GTF2A2 GTF2A2 RTF1 RTF1 ENSCCAP00000019805 ENSCCAP00000019805 MMS19 MMS19 GTF2H1 GTF2H1 POLR2J POLR2J CDC73 CDC73 CDK7 CDK7 ENSCCAP00000024134 ENSCCAP00000024134 GTF2H5 GTF2H5 WDR61 WDR61 RECQL5 RECQL5 PAF1 PAF1 GTF2H2 GTF2H2 CCNH CCNH LOC108307710 LOC108307710 RPRD2 RPRD2 TRRAP TRRAP LOC108310878 LOC108310878 GTF2H3 GTF2H3 ENSCCAP00000030858 ENSCCAP00000030858 TAF4B TAF4B GTF2A1 GTF2A1 MNAT1 MNAT1 TAF10 TAF10 TADA3 TADA3 ENSCCAP00000032998 ENSCCAP00000032998 POLR2M POLR2M POLR2H POLR2H POLR2L POLR2L MYO6 MYO6 TAF3 TAF3 POLR2C POLR2C POLR2F POLR2F TAF7L TAF7L TAF6L TAF6L GTF2F1 GTF2F1 TAF12 TAF12 TBPL1 TBPL1 ATXN7L3 ATXN7L3 POLR2D POLR2D CTR9 CTR9 ENSCCAP00000000291 ENSCCAP00000000291 ENSCCAP00000000379 ENSCCAP00000000379 LOC108318591 LOC108318591 GTF2E2 GTF2E2 SUPT3H SUPT3H TCEA1 TCEA1 TAF13 TAF13 SETD5 SETD5 POLR2K POLR2K TAF8 TAF8 TAF4 TAF4 ERCC2 ERCC2 ENY2-2 ENY2-2 GTF2F2 GTF2F2 POLR2A POLR2A GTF2H4 GTF2H4 POLR2I POLR2I LOC108299500 LOC108299500 TAF6 TAF6 ATXN7 ATXN7 ENY2 ENY2 TAF2 TAF2 KAT2A KAT2A ENSCCAP00000013232 ENSCCAP00000013232 RPRD1B RPRD1B RPAP2 RPAP2 RPRD1A RPRD1A POLR2E POLR2E POLR2B POLR2B GTF2A1L GTF2A1L TBP TBP GTF2E1 GTF2E1 TAF5 TAF5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
ENSCCAP00000017342TFIIA_gamma_N domain-containing protein. (81 aa)
TAF9BTATA-box binding protein associated factor 9b. (251 aa)
TAF11TATA-box binding protein associated factor 11. (211 aa)
TAF5LTATA-box binding protein associated factor 5 like. (519 aa)
TAF1Transcription initiation factor TFIID subunit. (1927 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (643 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
MMS19MMS19 homolog, cytosolic iron-sulfur assembly component. (1030 aa)
GTF2H1General transcription factor IIH subunit 1. (555 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (185 aa)
CDC73Cell division cycle 73. (531 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
ENSCCAP00000024134Uncharacterized protein. (120 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
WDR61WD repeat domain 61. (305 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (990 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (529 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1460 aa)
TRRAPTransformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. (3789 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
GTF2H3General transcription factor IIH subunit 3. (287 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
TAF4BTATA-box binding protein associated factor 4b. (861 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
TADA3Transcriptional adaptor 3. (432 aa)
ENSCCAP00000032998General transcription factor IIH subunit. (384 aa)
POLR2MRNA polymerase II subunit M. (369 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
MYO6Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1294 aa)
TAF3TATA-box binding protein associated factor 3. (931 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
TAF7LTATA-box binding protein associated factor 7 like. (463 aa)
TAF6LTATA-box binding protein associated factor 6 like. (622 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
TAF12TATA-box binding protein associated factor 12. (213 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
ATXN7L3Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] (354 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
ENSCCAP00000000291Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (91 aa)
ENSCCAP00000000379Uncharacterized protein. (57 aa)
LOC108318591Uncharacterized protein. (58 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (283 aa)
TCEA1Transcription elongation factor A1. (262 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
SETD5SET domain containing 5. (1461 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
TAF8TATA-box binding protein associated factor 8. (312 aa)
TAF4TATA-box binding protein associated factor 4. (712 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (770 aa)
ENY2-2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] (89 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
LOC108299500Uncharacterized protein. (246 aa)
TAF6TATA-box binding protein associated factor 6. (713 aa)
ATXN7SCA7 domain-containing protein. (940 aa)
ENY2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] (101 aa)
TAF2TATA-box binding protein associated factor 2. (1199 aa)
KAT2ALysine acetyltransferase 2A. (839 aa)
ENSCCAP00000013232Uncharacterized protein. (264 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
RPAP2RNA polymerase II associated protein 2. (612 aa)
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (312 aa)
POLR2ERNA polymerase II subunit E. (227 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (477 aa)
TBPTATA-box binding protein. (329 aa)
GTF2E1General transcription factor IIE subunit 1. (342 aa)
TAF5TATA-box binding protein associated factor 5. (800 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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