(37 nodes) Protein palmitoylation network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZDHHC24	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (284 aa)
	ENSCCAP00000004401	Uncharacterized protein. (72 aa)
	ENSCCAP00000004736	Uncharacterized protein. (77 aa)
	LOC108303680	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (378 aa)
	ZDHHC12	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (267 aa)
	NUDT22	Nudix hydrolase 22. (303 aa)
	ZDHHC9	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (364 aa)
	ZDHHC6	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (413 aa)
	ZDHHC8	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (778 aa)
	GOLGA7	Golgin A7. (137 aa)
	ZDHHC19	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (310 aa)
	ENSCCAP00000011065	Uncharacterized protein. (78 aa)
	LOC108294168	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (351 aa)
	ZDHHC1	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (483 aa)
	ZDHHC17	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (632 aa)
	GLUL	Glutamine synthetase. (374 aa)
	LOC108316462	Uncharacterized protein. (199 aa)
	ZDHHC5	Zinc finger DHHC-type containing 5. (578 aa)
	CLIP3	CAP-Gly domain containing linker protein 3. (547 aa)
	ENSCCAP00000018653	Uncharacterized protein. (198 aa)
	HHAT	Hedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family. (494 aa)
	ZDHHC2	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (368 aa)
	ZDHHC3	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (331 aa)
	ZDHHC22	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (263 aa)
	ZDHHC16	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (377 aa)
	GOLGA7B	Golgin A7 family member B. (167 aa)
	ZDHHC15	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (337 aa)
	SELENOK	Uncharacterized protein. (93 aa)
	ZDHHC23	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (435 aa)
	PORCN	Porcupine O-acyltransferase; Belongs to the membrane-bound acyltransferase family. (461 aa)
	ZDHHC20	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (365 aa)
	ZDHHC14	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (487 aa)
	MAP6D1	MAP6 domain containing 1. (195 aa)
	ZDHHC21	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (265 aa)
	ZDHHC18	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (388 aa)
	ZDHHC7	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (346 aa)
	ZDHHC4	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (305 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GOLGA7	ZDHHC14	ENSCCAP00000009685	ENSCCAP00000037013	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.610
GOLGA7	ZDHHC18	ENSCCAP00000009685	ENSCCAP00000038391	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.610
GOLGA7	ZDHHC19	ENSCCAP00000009685	ENSCCAP00000010660	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.635
GOLGA7	ZDHHC22	ENSCCAP00000009685	ENSCCAP00000025095	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.425
GOLGA7	ZDHHC24	ENSCCAP00000009685	ENSCCAP00000004119	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.459
GOLGA7	ZDHHC3	ENSCCAP00000009685	ENSCCAP00000023716	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.450
GOLGA7	ZDHHC5	ENSCCAP00000009685	ENSCCAP00000017710	Golgin A7.	Zinc finger DHHC-type containing 5.	0.963
GOLGA7	ZDHHC7	ENSCCAP00000009685	ENSCCAP00000038876	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.406
GOLGA7	ZDHHC8	ENSCCAP00000009685	ENSCCAP00000009176	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.702
GOLGA7	ZDHHC9	ENSCCAP00000009685	ENSCCAP00000007024	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.907
GOLGA7B	ZDHHC14	ENSCCAP00000029227	ENSCCAP00000037013	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.610
GOLGA7B	ZDHHC18	ENSCCAP00000029227	ENSCCAP00000038391	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.610
GOLGA7B	ZDHHC19	ENSCCAP00000029227	ENSCCAP00000010660	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.635
GOLGA7B	ZDHHC22	ENSCCAP00000029227	ENSCCAP00000025095	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.425
GOLGA7B	ZDHHC24	ENSCCAP00000029227	ENSCCAP00000004119	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.459
GOLGA7B	ZDHHC5	ENSCCAP00000029227	ENSCCAP00000017710	Golgin A7 family member B.	Zinc finger DHHC-type containing 5.	0.894
GOLGA7B	ZDHHC8	ENSCCAP00000029227	ENSCCAP00000009176	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.702
GOLGA7B	ZDHHC9	ENSCCAP00000029227	ENSCCAP00000007024	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.754
HHAT	PORCN	ENSCCAP00000022802	ENSCCAP00000034314	Hedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family.	Porcupine O-acyltransferase; Belongs to the membrane-bound acyltransferase family.	0.400
LOC108294168	ZDHHC24	ENSCCAP00000011130	ENSCCAP00000004119	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.489