STRINGSTRING
WDR33 WDR33 PAF1 PAF1 CLP1 CLP1 TENT4B TENT4B MBLAC1 MBLAC1 LOC108316776 LOC108316776 CPSF7 CPSF7 RPRD2 RPRD2 NCBP1 NCBP1 AHCYL1 AHCYL1 CSTF2 CSTF2 ZC3H3 ZC3H3 TUT1 TUT1 LSM10 LSM10 FNDC10 FNDC10 ENSCCAP00000006114 ENSCCAP00000006114 APLP1 APLP1 LSM11 LSM11 ENSCCAP00000007567 ENSCCAP00000007567 PCF11 PCF11 PABPC1L PABPC1L ENSCCAP00000012792 ENSCCAP00000012792 RPRD1B RPRD1B CSTF3 CSTF3 SCAF8 SCAF8 PAPOLA PAPOLA TENT2 TENT2 LEO1 LEO1 SLBP SLBP PAPOLG PAPOLG SSU72 SSU72 ENSCCAP00000019825 ENSCCAP00000019825 CPSF2 CPSF2 CPSF6 CPSF6 SYMPK SYMPK ZNF473 ZNF473 NUDT21 NUDT21 CPSF4 CPSF4 GRSF1 GRSF1 LOC108317150 LOC108317150 PNPT1 PNPT1 POLR2D POLR2D CPSF1 CPSF1 CPSF3 CPSF3 APP APP CDC73 CDC73 TMEM240 TMEM240 CSTF1 CSTF1 CPSF4L CPSF4L MTPAP MTPAP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WDR33WD repeat domain 33. (1336 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (529 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
TENT4BTerminal nucleotidyltransferase 4B. (695 aa)
MBLAC1Metallo-beta-lactamase domain containing 1. (266 aa)
LOC108316776Sm domain-containing protein. (123 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (553 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1460 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
AHCYL1Adenosylhomocysteinase like 1; Belongs to the adenosylhomocysteinase family. (483 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
ZC3H3Zinc finger CCCH-type containing 3. (950 aa)
TUT1RRM domain-containing protein. (912 aa)
LSM10Sm domain-containing protein. (123 aa)
FNDC10Fibronectin type III domain containing 10. (229 aa)
ENSCCAP00000006114RRM domain-containing protein. (337 aa)
APLP1Amyloid beta precursor like protein 1. (654 aa)
LSM11LSM11, U7 small nuclear RNA associated. (360 aa)
ENSCCAP00000007567Uncharacterized protein. (253 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (614 aa)
ENSCCAP00000012792RRM domain-containing protein. (300 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
CSTF3Cleavage stimulation factor subunit 3. (717 aa)
SCAF8SR-related CTD associated factor 8. (1336 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
TENT2Terminal nucleotidyltransferase 2. (484 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
SLBPStem-loop binding protein. (190 aa)
PAPOLGPoly(A) polymerase gamma. (736 aa)
SSU72Uncharacterized protein. (194 aa)
ENSCCAP00000019825Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (211 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (589 aa)
SYMPKSymplekin. (1293 aa)
ZNF473Zinc finger protein 473. (868 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
GRSF1Uncharacterized protein. (479 aa)
LOC108317150Uncharacterized protein. (198 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (784 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1442 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (684 aa)
APPAmyloid beta precursor protein. (770 aa)
CDC73Cell division cycle 73. (531 aa)
TMEM240Transmembrane protein 240. (173 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (135 aa)
MTPAPMitochondrial poly(A) polymerase. (582 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.