110 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MPP1	Membrane palmitoylated protein 1; Belongs to the MAGUK family. (466 aa)
	BBS9	Bardet-Biedl syndrome 9. (887 aa)
	CD2AP	CD2 associated protein. (639 aa)
	YTHDF2	YTH N6-methyladenosine RNA binding protein 2. (587 aa)
	PLK1	Serine/threonine-protein kinase PLK. (602 aa)
	ENSCCAP00000019825	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (211 aa)
	RPP25	Ribonuclease P and MRP subunit p25. (199 aa)
	PIK3R5	Phosphoinositide-3-kinase regulatory subunit 5. (878 aa)
	CEP131	Centrosomal protein 131. (1085 aa)
	FLOT1	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (427 aa)
	PLA2G6	Phospholipase A2 group VI. (806 aa)
	KIAA0753	KIAA0753. (967 aa)
	KEAP1	Kelch like ECH associated protein 1. (563 aa)
	BBS5	Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...] (313 aa)
	CLECL1	C-type lectin like 1. (187 aa)
	CCDC61	Coiled-coil domain containing 61. (508 aa)
	UBN1	Ubinuclein 1. (1132 aa)
	MID1	Midline 1. (667 aa)
	PODXL	Podocalyxin; Involved in the regulation of both adhesion and cell morphology and cancer progression. Function as an anti-adhesive molecule that maintains an open filtration pathway between neighboring foot processes in the podocyte by charge repulsion. Belongs to the podocalyxin family. (506 aa)
	NLRC3	NLR family CARD domain containing 3. (1095 aa)
	ENSCCAP00000024056	Smg4_UPF3 domain-containing protein. (377 aa)
	MAP11	Microtubule associated protein 11. (580 aa)
	C2CD3	C2 domain containing 3 centriole elongation regulator. (2353 aa)
	ENSCCAP00000025361	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (463 aa)
	FRMD8	FERM domain containing 8. (464 aa)
	KLHL4	Kelch like family member 4. (718 aa)
	HOOK3	Hook microtubule tethering protein 3. (747 aa)
	DCDC2	Doublecortin domain containing 2. (476 aa)
	WDR62	WD repeat domain 62. (1503 aa)
	GPR174	G protein-coupled receptor 174. (333 aa)
	RAB11FIP3	RAB11 family interacting protein 3. (785 aa)
	RBM39	RNA binding motif protein 39. (530 aa)
	PXK	PX domain containing serine/threonine kinase like. (578 aa)
	FOPNL	FGFR1OP N-terminal like. (174 aa)
	NR0B1	Nuclear receptor subfamily 0 group B member 1. (470 aa)
	ENSCCAP00000029150	IF rod domain-containing protein; Belongs to the intermediate filament family. (414 aa)
	IL4R	Interleukin 4 receptor. (850 aa)
	LOC108316220	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (501 aa)
	TEK	TEK receptor tyrosine kinase. (1069 aa)
	ALDOB	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (364 aa)
	PARD6A	Par-6 family cell polarity regulator alpha. (346 aa)
	G6PD	Uncharacterized protein. (560 aa)
	AK5	Adenylate kinase 5; Belongs to the adenylate kinase family. (562 aa)
	KLHL12	Kelch like family member 12. (548 aa)
	PRKCQ	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (710 aa)
	CHD3	Chromodomain helicase DNA binding protein 3. (2059 aa)
	PCM1	Pericentriolar material 1. (2024 aa)
	ENSCCAP00000034935	Uncharacterized protein. (463 aa)
	NUDT21	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
	MIEN1	Migration and invasion enhancer 1. (115 aa)
	PAX2	Paired box 2. (417 aa)
	ENSCCAP00000036032	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (382 aa)
	SPAG5	Sperm associated antigen 5. (1193 aa)
	ITGB1BP1	Integrin subunit beta 1 binding protein 1. (200 aa)
	FLII	FLII actin remodeling protein. (1276 aa)
	CCDC113	Coiled-coil domain containing 113. (377 aa)
	PCNT	Pericentrin. (3278 aa)
	ENSCCAP00000037596	Uncharacterized protein. (142 aa)
	ODF2L	Outer dense fiber of sperm tails 2 like. (637 aa)
	CCDC13	Uncharacterized protein. (714 aa)
	WDR13	WD repeat domain 13. (580 aa)
	LRIF1	Ligand dependent nuclear receptor interacting factor 1. (759 aa)
	SKA1	Spindle and kinetochore associated complex subunit 1. (255 aa)
	FNIP2	Folliculin interacting protein 2. (1118 aa)
	RSKR	Ribosomal protein S6 kinase related. (404 aa)
	SPAG9	Sperm associated antigen 9. (1321 aa)
	LOC108308592	IF rod domain-containing protein; Belongs to the intermediate filament family. (429 aa)
	TAF1D	TATA-box binding protein associated factor, RNA polymerase I subunit D. (277 aa)
	NEK6	NIMA related kinase 6; Belongs to the protein kinase superfamily. (347 aa)
	IFT43	Intraflagellar transport 43. (213 aa)
	ZBED6	Zinc finger BED-type containing 6. (978 aa)
	KNSTRN	Kinetochore localized astrin (SPAG5) binding protein. (316 aa)
	ZMYND10	Zinc finger MYND domain-containing protein 10; Plays a role in axonemal structure organization and motility. Involved in axonemal pre-assembly of inner and outer dynein arms (IDA and ODA, respectively) for proper axoneme building for cilia motility. May act by indirectly regulating transcription of dynein proteins. Belongs to the ZMYND10 family. (440 aa)
	LATS2	Non-specific serine/threonine protein kinase. (1085 aa)
	PTPN20	Protein tyrosine phosphatase non-receptor type 20. (421 aa)
	DLGAP5	DLG associated protein 5. (847 aa)
	PATJ	PATJ crumbs cell polarity complex component. (1705 aa)
	BBS1	BBS1 domain-containing protein. (593 aa)
	CYTH4	Cytohesin 4. (394 aa)
	ENSCCAP00000008476	Smg4_UPF3 domain-containing protein. (272 aa)
	RASSF7	Ras association domain family member 7. (371 aa)
	CCDC57	Coiled-coil domain containing 57. (916 aa)
	CEP290	Centrosomal protein 290. (2457 aa)
	CENPU	Centromere protein U. (419 aa)
	DDHD2	DDHD domain containing 2. (711 aa)
	DYSF	Dysferlin. (2121 aa)
	TMEM63A	Transmembrane protein 63A. (801 aa)
	CD86	CD86 molecule. (330 aa)
	CEP68	Centrosomal protein 68. (748 aa)
	OFD1	OFD1 centriole and centriolar satellite protein. (1006 aa)
	CCDC14	Coiled-coil domain containing 14. (870 aa)
	ENSCCAP00000011501	IF rod domain-containing protein; Belongs to the intermediate filament family. (399 aa)
	TRAT1	T cell receptor associated transmembrane adaptor 1. (187 aa)
	CEP162	Centrosomal protein 162. (1399 aa)
	CEP72	Centrosomal protein 72. (404 aa)
	CCDC66	Coiled-coil domain containing 66. (945 aa)
	TAP1	Transporter 1, ATP binding cassette subfamily B member. (793 aa)
	SDCCAG8	Serologically defined colon cancer antigen 8. (740 aa)
	DBH	Dopamine beta-hydroxylase. (621 aa)
	BBS4	Bardet-Biedl syndrome 4. (494 aa)
	CNTRL	Centriolin. (2325 aa)
	RAB11FIP5	Uncharacterized protein. (1312 aa)
	LOC108315637	IF rod domain-containing protein; Belongs to the intermediate filament family. (425 aa)
	SSX2IP	SSX family member 2 interacting protein. (614 aa)
	RASSF8	Ras association domain family member 8. (419 aa)
	NAA40	N(alpha)-acetyltransferase 40, NatD catalytic subunit. (219 aa)
	PIBF1	Progesterone immunomodulatory binding factor 1. (757 aa)
	KRT18	IF rod domain-containing protein; Belongs to the intermediate filament family. (315 aa)
	EXOC7	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (660 aa)
	KIF5B	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (927 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDOB	G6PD	ENSCCAP00000030697	ENSCCAP00000031789	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Uncharacterized protein.	0.748
ALDOB	LOC108316220	ENSCCAP00000030697	ENSCCAP00000030131	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.748
BBS1	BBS4	ENSCCAP00000006504	ENSCCAP00000014204	BBS1 domain-containing protein.	Bardet-Biedl syndrome 4.	0.992
BBS1	BBS5	ENSCCAP00000006504	ENSCCAP00000021294	BBS1 domain-containing protein.	Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...]	0.991
BBS1	BBS9	ENSCCAP00000006504	ENSCCAP00000018507	BBS1 domain-containing protein.	Bardet-Biedl syndrome 9.	0.993
BBS1	CEP290	ENSCCAP00000006504	ENSCCAP00000009093	BBS1 domain-containing protein.	Centrosomal protein 290.	0.589
BBS1	IFT43	ENSCCAP00000006504	ENSCCAP00000004187	BBS1 domain-containing protein.	Intraflagellar transport 43.	0.401
BBS1	KEAP1	ENSCCAP00000006504	ENSCCAP00000020594	BBS1 domain-containing protein.	Kelch like ECH associated protein 1.	0.698
BBS1	KLHL4	ENSCCAP00000006504	ENSCCAP00000026457	BBS1 domain-containing protein.	Kelch like family member 4.	0.698
BBS1	OFD1	ENSCCAP00000006504	ENSCCAP00000009786	BBS1 domain-containing protein.	OFD1 centriole and centriolar satellite protein.	0.420
BBS1	PCM1	ENSCCAP00000006504	ENSCCAP00000034830	BBS1 domain-containing protein.	Pericentriolar material 1.	0.436
BBS4	BBS1	ENSCCAP00000014204	ENSCCAP00000006504	Bardet-Biedl syndrome 4.	BBS1 domain-containing protein.	0.992
BBS4	BBS5	ENSCCAP00000014204	ENSCCAP00000021294	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...]	0.986
BBS4	BBS9	ENSCCAP00000014204	ENSCCAP00000018507	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 9.	0.996
BBS4	CEP131	ENSCCAP00000014204	ENSCCAP00000019897	Bardet-Biedl syndrome 4.	Centrosomal protein 131.	0.485
BBS4	CEP290	ENSCCAP00000014204	ENSCCAP00000009093	Bardet-Biedl syndrome 4.	Centrosomal protein 290.	0.598
BBS4	KEAP1	ENSCCAP00000014204	ENSCCAP00000020594	Bardet-Biedl syndrome 4.	Kelch like ECH associated protein 1.	0.631
BBS4	KLHL4	ENSCCAP00000014204	ENSCCAP00000026457	Bardet-Biedl syndrome 4.	Kelch like family member 4.	0.631
BBS4	OFD1	ENSCCAP00000014204	ENSCCAP00000009786	Bardet-Biedl syndrome 4.	OFD1 centriole and centriolar satellite protein.	0.464
BBS4	PCM1	ENSCCAP00000014204	ENSCCAP00000034830	Bardet-Biedl syndrome 4.	Pericentriolar material 1.	0.908