STRINGSTRING
LOC108290368 LOC108290368 NUDT13 NUDT13 DNASE1L1 DNASE1L1 RNASEH1 RNASEH1 DIS3L DIS3L GDA GDA DDX5 DDX5 PNPT1 PNPT1 LSM5 LSM5 LOC108297050 LOC108297050 POLR2D POLR2D CDADC1 CDADC1 ZC3H4 ZC3H4 NUDT18 NUDT18 PDE10A PDE10A LSM5-4 LSM5-4 PABPC4 PABPC4 PABPC3 PABPC3 LSM1 LSM1 METTL14 METTL14 ENSCCAP00000038386 ENSCCAP00000038386 MLYCD MLYCD TUT4 TUT4 XRN2 XRN2 CSDE1 CSDE1 XDH XDH ENPP4 ENPP4 OGG1 OGG1 ENSCCAP00000037661 ENSCCAP00000037661 PAN2 PAN2 DXO DXO RBM7 RBM7 LSM6 LSM6 PDE5A PDE5A LSM4 LSM4 CNOT3 CNOT3 NUDT17 NUDT17 PDE7B PDE7B MRTO4 MRTO4 EIF4A3 EIF4A3 DIS3L2 DIS3L2 ENPP3 ENPP3 UPF2 UPF2 SMUG1 SMUG1 DNASE2 DNASE2 ERN2 ERN2 SMG6 SMG6 NT5C3B NT5C3B ETF1 ETF1 DCP1A DCP1A DNASE1L2 DNASE1L2 PDE8B PDE8B PELO PELO LSM7 LSM7 TENT4B TENT4B TTC38 TTC38 SSB SSB ENSCCAP00000034367 ENSCCAP00000034367 SMG8 SMG8 FHIT FHIT ERN1 ERN1 XRN1 XRN1 NUDT15 NUDT15 ENSCCAP00000033006 ENSCCAP00000033006 RNPS1 RNPS1 LRRC27 LRRC27 DCP2 DCP2 AGO3 AGO3 PDE4C PDE4C CNOT2 CNOT2 ZFP36 ZFP36 METTL3 METTL3 TRIR TRIR SUPV3L1 SUPV3L1 APOBEC2 APOBEC2 SWT1 SWT1 ENSCCAP00000031543 ENSCCAP00000031543 MAGOH MAGOH CNOT6 CNOT6 ENSCCAP00000031241 ENSCCAP00000031241 CASC3 CASC3 ENSCCAP00000031091 ENSCCAP00000031091 ZCCHC7 ZCCHC7 ENSCCAP00000030858 ENSCCAP00000030858 CECR2 CECR2 LOC108315302 LOC108315302 HPRT1 HPRT1 APEX1 APEX1 TYMP TYMP EDC4 EDC4 ENTPD1 ENTPD1 LOC108310148 LOC108310148 BCLAF1 BCLAF1 ENSCCAP00000028972 ENSCCAP00000028972 NCBP1 NCBP1 UPF1 UPF1 LOC108287793 LOC108287793 GSPT2 GSPT2 LSM5-3 LSM5-3 CNOT7 CNOT7 ENSCCAP00000028175 ENSCCAP00000028175 DPYS DPYS LOC108288088 LOC108288088 LRPPRC LRPPRC LOC108298189 LOC108298189 PABPC4L PABPC4L ENTPD7 ENTPD7 SAMD4B SAMD4B LOC108296834 LOC108296834 PDE12 PDE12 MTPAP MTPAP DNASE2B DNASE2B APOBEC3C APOBEC3C APOBEC3A APOBEC3A ENSCCAP00000026158 ENSCCAP00000026158 VCP VCP DCPS DCPS EXOSC9 EXOSC9 NT5C NT5C AMPD3 AMPD3 ADA ADA ADAL ADAL RNASEH2A RNASEH2A FITM2 FITM2 AICDA AICDA PARN PARN NUDT9 NUDT9 NUDT5 NUDT5 ENSCCAP00000024871 ENSCCAP00000024871 CDA CDA ENSCCAP00000024056 ENSCCAP00000024056 MBD4 MBD4 UNG UNG DIS3 DIS3 UPP1 UPP1 SUCLG2 SUCLG2 EXOSC7 EXOSC7 PDE7A PDE7A DUT DUT ZPR1 ZPR1 DHX34 DHX34 ATM ATM SMG7 SMG7 RBM8A RBM8A NUDT19 NUDT19 PNP PNP ENSCCAP00000021366 ENSCCAP00000021366 ENTPD8 ENTPD8 THRAP3 THRAP3 TTC37 TTC37 ENDOG ENDOG METTL16 METTL16 NBAS NBAS ENSCCAP00000020522 ENSCCAP00000020522 PDE4A PDE4A ENTPD5 ENTPD5 SIDT2 SIDT2 HELZ2 HELZ2 ENTPD2 ENTPD2 ENSCCAP00000019805 ENSCCAP00000019805 PABPN1L PABPN1L CNOT11 CNOT11 NT5C3A NT5C3A LOC108295278 LOC108295278 LOC108289529 LOC108289529 SMG5 SMG5 ZFP36L2 ZFP36L2 YTHDF2 YTHDF2 LOC108296489 LOC108296489 PDE8A PDE8A DICER1 DICER1 REXO4 REXO4 RNASEH2B RNASEH2B EIF3E EIF3E DNASE1 DNASE1 CNOT1 CNOT1 DCP1B DCP1B SKIV2L SKIV2L NUDT11 NUDT11 PNLDC1 PNLDC1 PYM1 PYM1 CNOT8 CNOT8 RC3H1 RC3H1 TENT2 TENT2 EXOSC4 EXOSC4 DCTPP1 DCTPP1 RNASEH2C RNASEH2C ISG20 ISG20 NUDT12 NUDT12 PPP1R8 PPP1R8 LOC108299138 LOC108299138 KHSRP KHSRP PATL2 PATL2 ENTPD3 ENTPD3 TUT7 TUT7 CNOT6L CNOT6L ENSCCAP00000014300 ENSCCAP00000014300 ENSCCAP00000014238 ENSCCAP00000014238 NUDT3 NUDT3 NUDT8 NUDT8 CNOT4 CNOT4 SMG9 SMG9 HNRNPD HNRNPD DNASE1L3 DNASE1L3 WDR82 WDR82 UPB1 UPB1 LOC108284316 LOC108284316 LSM2 LSM2 SMG1 SMG1 ENSCCAP00000012572 ENSCCAP00000012572 FEN1 FEN1 EXOSC1 EXOSC1 ZC3H12A ZC3H12A PATL1 PATL1 ACAT1 ACAT1 LOC108299224 LOC108299224 OAS2 OAS2 EXOSC8 EXOSC8 EXOSC10 EXOSC10 FBH1 FBH1 RIDA RIDA ENSCCAP00000010701 ENSCCAP00000010701 ADA2 ADA2 ENSCCAP00000010495 ENSCCAP00000010495 DERA DERA ITPA ITPA EXOG EXOG CTIF CTIF NOCT NOCT DNA2 DNA2 LOC108291449 LOC108291449 SETMAR SETMAR ENTPD4 ENTPD4 ENSCCAP00000009065 ENSCCAP00000009065 NTHL1 NTHL1 APOBEC1 APOBEC1 ENSCCAP00000008669 ENSCCAP00000008669 RNASET2 RNASET2 NT5E NT5E ENSCCAP00000008476 ENSCCAP00000008476 PDE4D PDE4D SMPDL3A SMPDL3A ENSCCAP00000008083 ENSCCAP00000008083 ENPP1 ENPP1 ACOT7 ACOT7 EDC3 EDC3 SAMHD1 SAMHD1 ENSCCAP00000007600 ENSCCAP00000007600 NUDT16 NUDT16 DNPH1 DNPH1 MAGOHB MAGOHB PAN3 PAN3 SUCLG1 SUCLG1 DFFA DFFA MUS81 MUS81 UPP2 UPP2 LIN28B LIN28B PDE2A PDE2A NEIL1 NEIL1 PDE4B PDE4B ENSCCAP00000005811 ENSCCAP00000005811 ENSCCAP00000005485 ENSCCAP00000005485 NT5C1A NT5C1A ENSCCAP00000005127 ENSCCAP00000005127 ENSCCAP00000004993 ENSCCAP00000004993 MLH1 MLH1 TDG TDG EXOSC2 EXOSC2 LOC108308846 LOC108308846 ABCD1 ABCD1 ZHX2 ZHX2 POP1 POP1 UPF3A UPF3A CNP CNP CNOT9 CNOT9 NUDT7 NUDT7 NBDY NBDY MTREX MTREX MGAT1 MGAT1 ZC3H12D ZC3H12D EXOSC5 EXOSC5 LIN28A LIN28A AGO1 AGO1 NUDT4 NUDT4 ENSCCAP00000001719 ENSCCAP00000001719 EXOSC3 EXOSC3 APOBEC3H APOBEC3H ENSCCAP00000001306 ENSCCAP00000001306 ENTPD6 ENTPD6 ZFP36L1 ZFP36L1 SARM1 SARM1 HINT1 HINT1 DPYD DPYD AGO4 AGO4 PDE9A PDE9A RC3H2 RC3H2 ENSCCAP00000000247 ENSCCAP00000000247 LSM5-2 LSM5-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108290368Nudix hydrolase domain-containing protein. (206 aa)
NUDT13Nudix hydrolase 13. (352 aa)
DNASE1L1Deoxyribonuclease; Belongs to the DNase I family. (302 aa)
RNASEH1Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (288 aa)
DIS3LDIS3 like exosome 3'-5' exoribonuclease. (961 aa)
GDAGuanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (472 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (784 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
LOC108297050Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (571 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
CDADC1Cytidine and dCMP deaminase domain containing 1. (515 aa)
ZC3H4Zinc finger CCCH-type containing 4. (1303 aa)
NUDT18Nudix hydrolase 18; Belongs to the Nudix hydrolase family. (323 aa)
PDE10APhosphodiesterase. (787 aa)
LSM5-4U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (77 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (659 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (631 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
METTL14Methyltransferase like 14; Belongs to the MT-A70-like family. (456 aa)
ENSCCAP00000038386CCHC-type domain-containing protein. (197 aa)
MLYCDMalonyl-CoA decarboxylase. (493 aa)
TUT4Terminal uridylyl transferase 4. (1494 aa)
XRN2XRN_M domain-containing protein. (370 aa)
CSDE1Uncharacterized protein. (844 aa)
XDHXanthine dehydrogenase. (1333 aa)
ENPP4Ectonucleotide pyrophosphatase/phosphodiesterase 4. (453 aa)
OGG18-oxoguanine DNA glycosylase. (402 aa)
ENSCCAP00000037661Uncharacterized protein. (119 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1202 aa)
DXODecapping exoribonuclease. (396 aa)
RBM7RRM domain-containing protein. (264 aa)
LSM6Sm domain-containing protein. (80 aa)
PDE5APhosphodiesterase. (875 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (754 aa)
NUDT17Nudix hydrolase 17. (351 aa)
PDE7BPhosphodiesterase. (505 aa)
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (428 aa)
DIS3L2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase, such as ZCCHC11/TUT4. Mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. Mediates degradation of uridylated pre-let-7 miRNAs, contributing to the maintenance of embryonic stem (ES) cells. Essential for correct mi [...] (848 aa)
ENPP3Ectonucleotide pyrophosphatase/phosphodiesterase 3. (878 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1234 aa)
SMUG1Uncharacterized protein. (270 aa)
DNASE2Deoxyribonuclease 2, lysosomal. (233 aa)
ERN2Endoplasmic reticulum to nucleus signaling 2. (923 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1419 aa)
NT5C3B5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family. (300 aa)
ETF1eRF1_1 domain-containing protein. (423 aa)
DCP1ADecapping mRNA 1A. (581 aa)
DNASE1L2Deoxyribonuclease; Belongs to the DNase I family. (299 aa)
PDE8BPhosphodiesterase. (885 aa)
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (102 aa)
TENT4BTerminal nucleotidyltransferase 4B. (695 aa)
TTC38Tetratricopeptide repeat domain 38. (468 aa)
SSBSmall RNA binding exonuclease protection factor La. (405 aa)
ENSCCAP00000034367PAM2 domain-containing protein. (233 aa)
SMG8SMG8 nonsense mediated mRNA decay factor. (991 aa)
FHITBis(5'-adenosyl)-triphosphatase. (149 aa)
ERN1Endoplasmic reticulum to nucleus signaling 1. (967 aa)
XRN15'-3' exoribonuclease 1. (1707 aa)
NUDT15Nudix hydrolase 15. (164 aa)
ENSCCAP00000033006UDG domain-containing protein. (282 aa)
RNPS1RNA binding protein with serine rich domain 1. (305 aa)
LRRC27Leucine rich repeat containing 27. (519 aa)
DCP2Decapping mRNA 2. (441 aa)
AGO3Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (860 aa)
PDE4CPhosphodiesterase. (712 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (546 aa)
ZFP36ZFP36 ring finger protein. (332 aa)
METTL3Methyltransferase like 3; Belongs to the MT-A70-like family. (580 aa)
TRIRTelomerase RNA component interacting RNase. (176 aa)
SUPV3L1Suv3 like RNA helicase. (766 aa)
APOBEC2Apolipoprotein B mRNA editing enzyme catalytic subunit 2. (224 aa)
SWT1SWT1 RNA endoribonuclease homolog. (901 aa)
ENSCCAP00000031543CIDE-N domain-containing protein. (156 aa)
MAGOHUncharacterized protein. (149 aa)
CNOT6CCR4-NOT transcription complex subunit 6. (539 aa)
ENSCCAP00000031241Uncharacterized protein. (387 aa)
CASC3CASC3 exon junction complex subunit. (704 aa)
ENSCCAP00000031091Uncharacterized protein. (66 aa)
ZCCHC7Zinc finger CCHC-type containing 7. (543 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
CECR2CECR2 histone acetyl-lysine reader. (1431 aa)
LOC108315302Uncharacterized protein. (406 aa)
HPRT1Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (218 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
TYMPThymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. (482 aa)
EDC4Enhancer of mRNA decapping 4. (1406 aa)
ENTPD1Ectonucleoside triphosphate diphosphohydrolase 1; Belongs to the GDA1/CD39 NTPase family. (522 aa)
LOC108310148U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (79 aa)
BCLAF1BCL2 associated transcription factor 1. (872 aa)
ENSCCAP00000028972Uncharacterized protein. (361 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
UPF1UPF1 RNA helicase and ATPase. (1151 aa)
LOC108287793Uncharacterized protein. (368 aa)
GSPT2G1 to S phase transition 2. (626 aa)
LSM5-3U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
CNOT7Uncharacterized protein. (285 aa)
ENSCCAP00000028175Uncharacterized protein. (375 aa)
DPYSDihydropyrimidinase. (519 aa)
LOC108288088DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (305 aa)
LRPPRCPPR_long domain-containing protein. (1395 aa)
LOC108298189Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (585 aa)
PABPC4LPoly(A) binding protein cytoplasmic 4 like. (428 aa)
ENTPD7Ectonucleoside triphosphate diphosphohydrolase 7; Belongs to the GDA1/CD39 NTPase family. (605 aa)
SAMD4BSterile alpha motif domain containing 4B. (694 aa)
LOC108296834Uncharacterized protein. (514 aa)
PDE12Phosphodiesterase 12. (547 aa)
MTPAPMitochondrial poly(A) polymerase. (582 aa)
DNASE2BDeoxyribonuclease 2 beta. (361 aa)
APOBEC3CCMP/dCMP-type deaminase domain-containing protein. (221 aa)
APOBEC3ACMP/dCMP-type deaminase domain-containing protein. (206 aa)
ENSCCAP00000026158CSD_1 domain-containing protein. (440 aa)
VCPValosin containing protein; Belongs to the AAA ATPase family. (807 aa)
DCPSDecapping enzyme, scavenger. (354 aa)
EXOSC9Exosome component 9. (442 aa)
NT5C5', 3'-nucleotidase, cytosolic. (201 aa)
AMPD3AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. (777 aa)
ADAA_deaminase domain-containing protein. (363 aa)
ADALAdenosine deaminase like. (355 aa)
RNASEH2ARibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (300 aa)
FITM2Fat storage inducing transmembrane protein 2. (262 aa)
AICDAActivation induced cytidine deaminase. (183 aa)
PARNPoly(A)-specific ribonuclease. (639 aa)
NUDT9Nudix hydrolase 9. (350 aa)
NUDT5Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (230 aa)
ENSCCAP00000024871eRF1_1 domain-containing protein. (98 aa)
CDACytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (146 aa)
ENSCCAP00000024056Smg4_UPF3 domain-containing protein. (377 aa)
MBD4Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. (579 aa)
UNGUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (313 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (959 aa)
UPP1Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. (310 aa)
SUCLG2Succinate-CoA ligase GDP-forming beta subunit. (436 aa)
EXOSC7Exosome component 7. (291 aa)
PDE7APhosphodiesterase. (460 aa)
DUTDeoxyuridine triphosphatase. (250 aa)
ZPR1ZPR1 zinc finger. (459 aa)
DHX34DExH-box helicase 34. (1144 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3000 aa)
SMG7SMG7 nonsense mediated mRNA decay factor. (1144 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
NUDT19Nudix hydrolase 19. (376 aa)
PNPPurine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (289 aa)
ENSCCAP00000021366Uncharacterized protein. (489 aa)
ENTPD8Ectonucleoside triphosphate diphosphohydrolase 8; Belongs to the GDA1/CD39 NTPase family. (494 aa)
THRAP3Thyroid hormone receptor associated protein 3. (955 aa)
TTC37Tetratricopeptide repeat domain 37. (1564 aa)
ENDOGEndonuclease. (285 aa)
METTL16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (554 aa)
NBASNeuroblastoma amplified sequence. (2372 aa)
ENSCCAP00000020522Uncharacterized protein. (129 aa)
PDE4APhosphodiesterase. (804 aa)
ENTPD5Ectonucleoside triphosphate diphosphohydrolase 5 (inactive); Belongs to the GDA1/CD39 NTPase family. (427 aa)
SIDT2SID1 transmembrane family member 2. (861 aa)
HELZ2Helicase with zinc finger 2. (2644 aa)
ENTPD2Ectonucleoside triphosphate diphosphohydrolase 2; Belongs to the GDA1/CD39 NTPase family. (495 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (274 aa)
CNOT11CCR4-NOT transcription complex subunit 11. (510 aa)
NT5C3A5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family. (336 aa)
LOC108295278Uncharacterized protein. (544 aa)
LOC108289529Uncharacterized protein. (384 aa)
SMG5SMG5 nonsense mediated mRNA decay factor. (1016 aa)
ZFP36L2ZFP36 ring finger protein like 2. (493 aa)
YTHDF2YTH N6-methyladenosine RNA binding protein 2. (587 aa)
LOC108296489Phosphodiesterase. (726 aa)
PDE8APhosphodiesterase. (836 aa)
DICER1Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. (1922 aa)
REXO4REX4 homolog, 3'-5' exonuclease. (397 aa)
RNASEH2BRibonuclease H2 subunit B. (309 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (473 aa)
DNASE1Deoxyribonuclease; Belongs to the DNase I family. (282 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2337 aa)
DCP1BDecapping mRNA 1B. (619 aa)
SKIV2LSki2 like RNA helicase. (1246 aa)
NUDT11Nudix hydrolase 11. (164 aa)
PNLDC1PARN like, ribonuclease domain containing 1. (531 aa)
PYM1PYM homolog 1, exon junction complex associated factor. (204 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (238 aa)
RC3H1Ring finger and CCCH-type domains 1. (1120 aa)
TENT2Terminal nucleotidyltransferase 2. (484 aa)
EXOSC4Exosome component 4. (207 aa)
DCTPP1dCTP pyrophosphatase 1; Hydrolyzes deoxynucleoside triphosphates (dNTPs) to the corresponding nucleoside monophosphates. Has a strong preference for dCTP and its analogs including 5-iodo-dCTP and 5-methyl-dCTP for which it may even have a higher efficiency. May protect DNA or RNA against the incorporation of these genotoxic nucleotide analogs through their catabolism. (170 aa)
RNASEH2CRibonuclease H2 subunit C. (163 aa)
ISG20Interferon stimulated exonuclease gene 20. (181 aa)
NUDT12Nudix hydrolase 12. (462 aa)
PPP1R8Protein phosphatase 1 regulatory subunit 8. (351 aa)
LOC108299138Uncharacterized protein. (123 aa)
KHSRPKH-type splicing regulatory protein. (684 aa)
PATL2PAT1 homolog 2. (537 aa)
ENTPD3Ectonucleoside triphosphate diphosphohydrolase 3; Belongs to the GDA1/CD39 NTPase family. (529 aa)
TUT7Uncharacterized protein. (1493 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (562 aa)
ENSCCAP00000014300Uncharacterized protein. (364 aa)
ENSCCAP00000014238HIT domain-containing protein. (89 aa)
NUDT3Nudix hydrolase 3. (132 aa)
NUDT8Nudix hydrolase domain-containing protein. (230 aa)
CNOT4CCR4-NOT transcription complex subunit 4. (713 aa)
SMG9SMG9 nonsense mediated mRNA decay factor. (520 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (355 aa)
DNASE1L3Deoxyribonuclease; Belongs to the DNase I family. (305 aa)
WDR82WD repeat domain 82. (313 aa)
UPB1Beta-ureidopropionase 1. (401 aa)
LOC108284316Uncharacterized protein. (206 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
SMG1SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3521 aa)
ENSCCAP00000012572Uncharacterized protein. (137 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (345 aa)
EXOSC1Exosome component 1. (169 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (598 aa)
PATL1PAT1 homolog 1, processing body mRNA decay factor. (770 aa)
ACAT1Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
LOC108299224Uncharacterized protein. (106 aa)
OAS22'-5'-oligoadenylate synthetase 2. (726 aa)
EXOSC8Exosome component 8. (276 aa)
EXOSC10Exosome component 10. (859 aa)
FBH1F-box DNA helicase 1. (1080 aa)
RIDAReactive intermediate imine deaminase A homolog. (164 aa)
ENSCCAP00000010701Uncharacterized protein. (259 aa)
ADA2Adenosine deaminase 2. (402 aa)
ENSCCAP00000010495Phosphodiesterase. (755 aa)
DERADeoxyribose-phosphate aldolase. (318 aa)
ITPAInosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes the non-canonical purine nucleotides inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) as well as 2'-deoxy-N-6-hydroxylaminopurine triposphate (dHAPTP) and xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions; Belongs to the HAM1 NTPase family. (207 aa)
EXOGExo/endonuclease G. (368 aa)
CTIFCap binding complex dependent translation initiation factor. (601 aa)
NOCTNocturnin. (431 aa)
DNA2DNA replication helicase/nuclease 2. (1060 aa)
LOC108291449RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
SETMARSET domain and mariner transposase fusion gene. (684 aa)
ENTPD4Ectonucleoside triphosphate diphosphohydrolase 4; Belongs to the GDA1/CD39 NTPase family. (616 aa)
ENSCCAP00000009065Uncharacterized protein. (120 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (312 aa)
APOBEC1Apolipoprotein B mRNA editing enzyme catalytic subunit 1. (236 aa)
ENSCCAP00000008669Uncharacterized protein. (275 aa)
RNASET2Uncharacterized protein; Belongs to the RNase T2 family. (256 aa)
NT5E5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. (574 aa)
ENSCCAP00000008476Smg4_UPF3 domain-containing protein. (272 aa)
PDE4DPhosphodiesterase. (808 aa)
SMPDL3AAcid sphingomyelinase-like phosphodiesterase. (453 aa)
ENSCCAP00000008083Sm domain-containing protein. (63 aa)
ENPP1Ectonucleotide pyrophosphatase/phosphodiesterase 1. (925 aa)
ACOT7Uncharacterized protein. (380 aa)
EDC3Enhancer of mRNA decapping 3. (508 aa)
SAMHD1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (509 aa)
ENSCCAP00000007600RRM domain-containing protein. (163 aa)
NUDT16Nudix hydrolase 16. (219 aa)
DNPH12'-deoxynucleoside 5'-phosphate N-hydrolase 1; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base. Deoxyribonucleoside 5'-monophosphates containing purine bases are preferred to those containing pyrimidine bases. (207 aa)
MAGOHBUncharacterized protein. (148 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (820 aa)
SUCLG1Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. (346 aa)
DFFADNA fragmentation factor subunit alpha. (331 aa)
MUS81MUS81 structure-specific endonuclease subunit. (552 aa)
UPP2Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. (365 aa)
LIN28BLin-28 homolog B. (262 aa)
PDE2APhosphodiesterase. (944 aa)
NEIL1Nei like DNA glycosylase 1. (390 aa)
PDE4BPhosphodiesterase. (736 aa)
ENSCCAP00000005811Sm domain-containing protein. (80 aa)
ENSCCAP00000005485Uncharacterized protein. (168 aa)
NT5C1A5'-nucleotidase, cytosolic IA. (371 aa)
ENSCCAP00000005127A_deaminase domain-containing protein. (260 aa)
ENSCCAP00000004993Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (193 aa)
MLH1MutL homolog 1. (757 aa)
TDGThymine DNA glycosylase. (410 aa)
EXOSC2Exosome component 2. (293 aa)
LOC108308846Uncharacterized protein. (235 aa)
ABCD1ATP binding cassette subfamily D member 1. (744 aa)
ZHX2Zinc fingers and homeoboxes 2. (837 aa)
POP1POP1 homolog, ribonuclease P/MRP subunit. (1008 aa)
UPF3AUPF3A regulator of nonsense mediated mRNA decay. (476 aa)
CNP2',3'-cyclic nucleotide 3' phosphodiesterase. (474 aa)
CNOT9Uncharacterized protein. (331 aa)
NUDT7Nudix hydrolase 7. (238 aa)
NBDYNegative regulator of P-body association. (68 aa)
MTREXMtr4 exosome RNA helicase. (1048 aa)
MGAT1Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase. (445 aa)
ZC3H12DZinc finger CCCH-type containing 12D. (529 aa)
EXOSC5Exosome component 5. (235 aa)
LIN28ACCHC-type domain-containing protein. (209 aa)
AGO1Argonaute RISC component 1; Belongs to the argonaute family. (857 aa)
NUDT4Nudix hydrolase domain-containing protein. (181 aa)
ENSCCAP00000001719CCHC-type domain-containing protein. (199 aa)
EXOSC3Exosome component 3. (310 aa)
APOBEC3HApolipoprotein B mRNA editing enzyme catalytic subunit 3H. (213 aa)
ENSCCAP00000001306Phosphodiesterase. (694 aa)
ENTPD6Ectonucleoside triphosphate diphosphohydrolase 6; Belongs to the GDA1/CD39 NTPase family. (482 aa)
ZFP36L1ZFP36 ring finger protein like 1. (338 aa)
SARM1Sterile alpha and TIR motif containing 1. (724 aa)
HINT1Histidine triad nucleotide binding protein 1. (126 aa)
DPYDDihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (996 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (861 aa)
PDE9APhosphodiesterase. (624 aa)
RC3H2Ring finger and CCCH-type domains 2. (1191 aa)
ENSCCAP00000000247Uncharacterized protein. (73 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
Server load: low (16%) [HD]