50 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NTRK2	Tyrosine-protein kinase receptor. (838 aa)
	CRB2	Crumbs cell polarity complex component 2. (1291 aa)
	PRDM1	PR/SET domain 1. (825 aa)
	USH1C	USH1 protein network component harmonin. (899 aa)
	DZANK1	Double zinc ribbon and ankyrin repeat domains 1. (722 aa)
	MFSD2A	Major facilitator superfamily domain containing 2A. (543 aa)
	THY1	Thy-1 cell surface antigen. (161 aa)
	RP1	RP1 axonemal microtubule associated. (2030 aa)
	TH	Tyrosine hydroxylase. (527 aa)
	C8orf37	Chromosome 8 open reading frame 37. (207 aa)
	ENSCCAP00000022251	Uncharacterized protein. (336 aa)
	ARL3	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (169 aa)
	GNAT1	G protein subunit alpha transducin 1. (350 aa)
	GNGT1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (74 aa)
	RORB	RAR related orphan receptor B. (470 aa)
	PAX6	Paired box 6. (447 aa)
	CABP4	Calcium binding protein 4. (272 aa)
	DCX	Doublecortin. (365 aa)
	ENSCCAP00000018987	Uncharacterized protein. (699 aa)
	RPGRIP1L	RPGRIP1 like. (1269 aa)
	OLFM3	Olfactomedin 3. (478 aa)
	BBS4	Bardet-Biedl syndrome 4. (494 aa)
	NR2E3	Nuclear receptor subfamily 2 group E member 3. (408 aa)
	PCARE	Photoreceptor cilium actin regulator. (1281 aa)
	RP1L1	RP1 like 1. (2302 aa)
	RDH13	Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (334 aa)
	FSCN2	Fascin. (492 aa)
	ROM1	Retinal outer segment membrane protein 1. (351 aa)
	PRKCI	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (596 aa)
	PDE6C	Phosphodiesterase. (858 aa)
	TULP1	Tubby-like protein; Belongs to the TUB family. (542 aa)
	NPHP4	Nephrocystin 4. (1426 aa)
	GNAT2	G protein subunit alpha transducin 2. (354 aa)
	HCN1	Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (884 aa)
	CEP290	Centrosomal protein 290. (2457 aa)
	AHI1	Abelson helper integration site 1. (1176 aa)
	BBS1	BBS1 domain-containing protein. (593 aa)
	CDHR1	Cadherin related family member 1. (859 aa)
	IFT140	Intraflagellar transport 140. (1461 aa)
	TOPORS	TOP1 binding arginine/serine rich protein. (1081 aa)
	IFT20	Intraflagellar transport 20. (139 aa)
	THRB	Thyroid hormone receptor beta. (476 aa)
	NRL	Neural retina leucine zipper. (237 aa)
	NAGLU	N-acetyl-alpha-glucosaminidase. (742 aa)
	CRB1	Crumbs cell polarity complex component 1. (1406 aa)
	CNGB1	Cyclic nucleotide gated channel subunit beta 1. (1232 aa)
	MFRP	Membrane frizzled-related protein. (577 aa)
	MYO7A	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2166 aa)
	PRPH2	Peripherin 2. (346 aa)
	RPGRIP1	RPGR interacting protein 1. (1250 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHI1	CEP290	ENSCCAP00000007565	ENSCCAP00000009093	Abelson helper integration site 1.	Centrosomal protein 290.	0.602
AHI1	NPHP4	ENSCCAP00000007565	ENSCCAP00000009970	Abelson helper integration site 1.	Nephrocystin 4.	0.532
AHI1	RPGRIP1	ENSCCAP00000007565	ENSCCAP00000031556	Abelson helper integration site 1.	RPGR interacting protein 1.	0.410
AHI1	RPGRIP1L	ENSCCAP00000007565	ENSCCAP00000017385	Abelson helper integration site 1.	RPGRIP1 like.	0.593
ARL3	BBS1	ENSCCAP00000021451	ENSCCAP00000006504	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	BBS1 domain-containing protein.	0.648
ARL3	CEP290	ENSCCAP00000021451	ENSCCAP00000009093	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Centrosomal protein 290.	0.551
ARL3	IFT140	ENSCCAP00000021451	ENSCCAP00000004590	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 140.	0.437
ARL3	IFT20	ENSCCAP00000021451	ENSCCAP00000003899	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 20.	0.622
ARL3	NPHP4	ENSCCAP00000021451	ENSCCAP00000009970	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Nephrocystin 4.	0.503
ARL3	RPGRIP1L	ENSCCAP00000021451	ENSCCAP00000017385	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	RPGRIP1 like.	0.479
BBS1	ARL3	ENSCCAP00000006504	ENSCCAP00000021451	BBS1 domain-containing protein.	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	0.648
BBS1	BBS4	ENSCCAP00000006504	ENSCCAP00000014204	BBS1 domain-containing protein.	Bardet-Biedl syndrome 4.	0.992
BBS1	CEP290	ENSCCAP00000006504	ENSCCAP00000009093	BBS1 domain-containing protein.	Centrosomal protein 290.	0.589
BBS1	IFT140	ENSCCAP00000006504	ENSCCAP00000004590	BBS1 domain-containing protein.	Intraflagellar transport 140.	0.584
BBS1	IFT20	ENSCCAP00000006504	ENSCCAP00000003899	BBS1 domain-containing protein.	Intraflagellar transport 20.	0.567
BBS1	NPHP4	ENSCCAP00000006504	ENSCCAP00000009970	BBS1 domain-containing protein.	Nephrocystin 4.	0.540
BBS1	RPGRIP1L	ENSCCAP00000006504	ENSCCAP00000017385	BBS1 domain-containing protein.	RPGRIP1 like.	0.540
BBS4	BBS1	ENSCCAP00000014204	ENSCCAP00000006504	Bardet-Biedl syndrome 4.	BBS1 domain-containing protein.	0.992
BBS4	CEP290	ENSCCAP00000014204	ENSCCAP00000009093	Bardet-Biedl syndrome 4.	Centrosomal protein 290.	0.598
BBS4	IFT140	ENSCCAP00000014204	ENSCCAP00000004590	Bardet-Biedl syndrome 4.	Intraflagellar transport 140.	0.583