34 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDE6C	Phosphodiesterase. (858 aa)
	TULP1	Tubby-like protein; Belongs to the TUB family. (542 aa)
	GNAT2	G protein subunit alpha transducin 2. (354 aa)
	HCN1	Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (884 aa)
	CEP290	Centrosomal protein 290. (2457 aa)
	TOPORS	TOP1 binding arginine/serine rich protein. (1081 aa)
	THRB	Thyroid hormone receptor beta. (476 aa)
	NRL	Neural retina leucine zipper. (237 aa)
	NAGLU	N-acetyl-alpha-glucosaminidase. (742 aa)
	CRB1	Crumbs cell polarity complex component 1. (1406 aa)
	GNAT1	G protein subunit alpha transducin 1. (350 aa)
	TH	Tyrosine hydroxylase. (527 aa)
	RP1	RP1 axonemal microtubule associated. (2030 aa)
	THY1	Thy-1 cell surface antigen. (161 aa)
	DZANK1	Double zinc ribbon and ankyrin repeat domains 1. (722 aa)
	USH1C	USH1 protein network component harmonin. (899 aa)
	PRDM1	PR/SET domain 1. (825 aa)
	CRB2	Crumbs cell polarity complex component 2. (1291 aa)
	NTRK2	Tyrosine-protein kinase receptor. (838 aa)
	RPGRIP1	RPGR interacting protein 1. (1250 aa)
	MYO7A	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2166 aa)
	MFRP	Membrane frizzled-related protein. (577 aa)
	GNGT1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (74 aa)
	RORB	RAR related orphan receptor B. (470 aa)
	PAX6	Paired box 6. (447 aa)
	CABP4	Calcium binding protein 4. (272 aa)
	ENSCCAP00000018987	Uncharacterized protein. (699 aa)
	RPGRIP1L	RPGRIP1 like. (1269 aa)
	OLFM3	Olfactomedin 3. (478 aa)
	BBS4	Bardet-Biedl syndrome 4. (494 aa)
	NR2E3	Nuclear receptor subfamily 2 group E member 3. (408 aa)
	RDH13	Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (334 aa)
	FSCN2	Fascin. (492 aa)
	PRKCI	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (596 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	CEP290	ENSCCAP00000014204	ENSCCAP00000009093	Bardet-Biedl syndrome 4.	Centrosomal protein 290.	0.598
BBS4	RPGRIP1L	ENSCCAP00000014204	ENSCCAP00000017385	Bardet-Biedl syndrome 4.	RPGRIP1 like.	0.461
CABP4	CEP290	ENSCCAP00000019247	ENSCCAP00000009093	Calcium binding protein 4.	Centrosomal protein 290.	0.421
CABP4	GNAT1	ENSCCAP00000019247	ENSCCAP00000020073	Calcium binding protein 4.	G protein subunit alpha transducin 1.	0.438
CABP4	NR2E3	ENSCCAP00000019247	ENSCCAP00000013676	Calcium binding protein 4.	Nuclear receptor subfamily 2 group E member 3.	0.559
CABP4	RPGRIP1	ENSCCAP00000019247	ENSCCAP00000031556	Calcium binding protein 4.	RPGR interacting protein 1.	0.455
CEP290	BBS4	ENSCCAP00000009093	ENSCCAP00000014204	Centrosomal protein 290.	Bardet-Biedl syndrome 4.	0.598
CEP290	CABP4	ENSCCAP00000009093	ENSCCAP00000019247	Centrosomal protein 290.	Calcium binding protein 4.	0.421
CEP290	RPGRIP1	ENSCCAP00000009093	ENSCCAP00000031556	Centrosomal protein 290.	RPGR interacting protein 1.	0.590
CEP290	RPGRIP1L	ENSCCAP00000009093	ENSCCAP00000017385	Centrosomal protein 290.	RPGRIP1 like.	0.638
CEP290	TULP1	ENSCCAP00000009093	ENSCCAP00000010389	Centrosomal protein 290.	Tubby-like protein; Belongs to the TUB family.	0.576
CRB1	CRB2	ENSCCAP00000000093	ENSCCAP00000030163	Crumbs cell polarity complex component 1.	Crumbs cell polarity complex component 2.	0.965
CRB2	CRB1	ENSCCAP00000030163	ENSCCAP00000000093	Crumbs cell polarity complex component 2.	Crumbs cell polarity complex component 1.	0.965
FSCN2	MYO7A	ENSCCAP00000011041	ENSCCAP00000035931	Fascin.	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.583
FSCN2	NRL	ENSCCAP00000011041	ENSCCAP00000002237	Fascin.	Neural retina leucine zipper.	0.437
GNAT1	CABP4	ENSCCAP00000020073	ENSCCAP00000019247	G protein subunit alpha transducin 1.	Calcium binding protein 4.	0.438
GNAT1	GNAT2	ENSCCAP00000020073	ENSCCAP00000009273	G protein subunit alpha transducin 1.	G protein subunit alpha transducin 2.	0.961
GNAT1	GNGT1	ENSCCAP00000020073	ENSCCAP00000020003	G protein subunit alpha transducin 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.952
GNAT1	PDE6C	ENSCCAP00000020073	ENSCCAP00000010559	G protein subunit alpha transducin 1.	Phosphodiesterase.	0.699
GNAT2	GNAT1	ENSCCAP00000009273	ENSCCAP00000020073	G protein subunit alpha transducin 2.	G protein subunit alpha transducin 1.	0.961