STRINGSTRING
PXDN PXDN SHH SHH NID1 NID1 LACRT LACRT NTN4 NTN4 SLIT2 SLIT2 DAG1 DAG1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PXDNPeroxidasin. (1479 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (464 aa)
NID1Nidogen 1. (1193 aa)
LACRTLacritin. (137 aa)
NTN4Netrin 4. (627 aa)
SLIT2Slit guidance ligand 2. (1541 aa)
DAG1Dystroglycan 1. (895 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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