44 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBS4	Bardet-Biedl syndrome 4. (494 aa)
	RHO	Rhodopsin. (348 aa)
	BBS10	Bardet-Biedl syndrome 10. (724 aa)
	CRB1	Crumbs cell polarity complex component 1. (1406 aa)
	USP45	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (788 aa)
	PROM1	Prominin 1. (865 aa)
	CLRN1	Clarin 1. (245 aa)
	IQCB1	IQ motif containing B1. (598 aa)
	CDHR1	Cadherin related family member 1. (859 aa)
	BBS1	BBS1 domain-containing protein. (593 aa)
	LCA5	Lebercilin LCA5. (695 aa)
	NPHP4	Nephrocystin 4. (1426 aa)
	USH2A	Usherin. (5202 aa)
	TULP1	Tubby-like protein; Belongs to the TUB family. (542 aa)
	ENSCCAP00000010551	Uncharacterized protein. (150 aa)
	CIB2	Uncharacterized protein. (187 aa)
	SPATA7	Spermatogenesis associated 7. (600 aa)
	TUB	Tubby-like protein; Belongs to the TUB family. (561 aa)
	DRAM2	DNA damage regulated autophagy modulator 2. (266 aa)
	RP1L1	RP1 like 1. (2302 aa)
	ERCC6	ERCC excision repair 6, chromatin remodeling factor. (1498 aa)
	CDH23	Cadherin related 23. (3359 aa)
	RDH12	Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
	MKKS	McKusick-Kaufman syndrome. (570 aa)
	ATP1B2	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (290 aa)
	CROCC2	Ciliary rootlet coiled-coil, rootletin family member 2. (1599 aa)
	CLN8	CLN8 transmembrane ER and ERGIC protein. (286 aa)
	MAK	Male germ cell associated kinase. (648 aa)
	NXNL1	Nucleoredoxin like 1. (212 aa)
	USH1G	USH1 protein network component sans. (461 aa)
	RP1	RP1 axonemal microtubule associated. (2030 aa)
	USH1C	USH1 protein network component harmonin. (899 aa)
	ENSCCAP00000027146	Uncharacterized protein. (482 aa)
	PCDH15	Protocadherin related 15. (1958 aa)
	CRB2	Crumbs cell polarity complex component 2. (1291 aa)
	BBS2	Bardet-Biedl syndrome 2. (614 aa)
	SLC2A1	Solute carrier family 2 member 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (508 aa)
	ABCA4	ATP binding cassette subfamily A member 4. (2274 aa)
	ADGRV1	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6306 aa)
	BSG	Basigin (Ok blood group). (385 aa)
	NXNL2	Nucleoredoxin like 2. (156 aa)
	CROCC	Ciliary rootlet coiled-coil, rootletin. (2017 aa)
	ENSCCAP00000037060	Uncharacterized protein. (352 aa)
	CNGB1	Cyclic nucleotide gated channel subunit beta 1. (1232 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA4	CNGB1	ENSCCAP00000031993	ENSCCAP00000040004	ATP binding cassette subfamily A member 4.	Cyclic nucleotide gated channel subunit beta 1.	0.432
ABCA4	MAK	ENSCCAP00000031993	ENSCCAP00000022051	ATP binding cassette subfamily A member 4.	Male germ cell associated kinase.	0.437
ABCA4	NXNL1	ENSCCAP00000031993	ENSCCAP00000024079	ATP binding cassette subfamily A member 4.	Nucleoredoxin like 1.	0.525
ABCA4	PROM1	ENSCCAP00000031993	ENSCCAP00000003801	ATP binding cassette subfamily A member 4.	Prominin 1.	0.674
ABCA4	RDH12	ENSCCAP00000031993	ENSCCAP00000015501	ATP binding cassette subfamily A member 4.	Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.449
ABCA4	RHO	ENSCCAP00000031993	ENSCCAP00000000656	ATP binding cassette subfamily A member 4.	Rhodopsin.	0.643
ABCA4	TULP1	ENSCCAP00000031993	ENSCCAP00000010389	ATP binding cassette subfamily A member 4.	Tubby-like protein; Belongs to the TUB family.	0.439
ABCA4	USH2A	ENSCCAP00000031993	ENSCCAP00000010078	ATP binding cassette subfamily A member 4.	Usherin.	0.669
ADGRV1	CDH23	ENSCCAP00000032278	ENSCCAP00000014921	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Cadherin related 23.	0.815
ADGRV1	CLRN1	ENSCCAP00000032278	ENSCCAP00000004811	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Clarin 1.	0.526
ADGRV1	PCDH15	ENSCCAP00000032278	ENSCCAP00000028624	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Protocadherin related 15.	0.770
ADGRV1	USH1C	ENSCCAP00000032278	ENSCCAP00000026074	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	USH1 protein network component harmonin.	0.613
ADGRV1	USH1G	ENSCCAP00000032278	ENSCCAP00000024399	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	USH1 protein network component sans.	0.578
ADGRV1	USH2A	ENSCCAP00000032278	ENSCCAP00000010078	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.	Usherin.	0.706
BBS1	BBS10	ENSCCAP00000006504	ENSCCAP00000001674	BBS1 domain-containing protein.	Bardet-Biedl syndrome 10.	0.611
BBS1	BBS2	ENSCCAP00000006504	ENSCCAP00000030645	BBS1 domain-containing protein.	Bardet-Biedl syndrome 2.	0.993
BBS1	BBS4	ENSCCAP00000006504	ENSCCAP00000014204	BBS1 domain-containing protein.	Bardet-Biedl syndrome 4.	0.992
BBS1	MKKS	ENSCCAP00000006504	ENSCCAP00000016549	BBS1 domain-containing protein.	McKusick-Kaufman syndrome.	0.400
BBS1	NPHP4	ENSCCAP00000006504	ENSCCAP00000009970	BBS1 domain-containing protein.	Nephrocystin 4.	0.540
BBS10	BBS1	ENSCCAP00000001674	ENSCCAP00000006504	Bardet-Biedl syndrome 10.	BBS1 domain-containing protein.	0.611