STRINGSTRING
SHH SHH CLCF1 CLCF1 LIF LIF MAG MAG TTBK1 TTBK1 SERPINE2 SERPINE2 PRPF19 PRPF19 BMP2 BMP2 IL6ST IL6ST BIN1 BIN1 NOTCH1 NOTCH1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (464 aa)
CLCF1Cardiotrophin like cytokine factor 1. (225 aa)
LIFLIF interleukin 6 family cytokine. (202 aa)
MAGMyelin associated glycoprotein. (626 aa)
TTBK1Tau tubulin kinase 1. (1322 aa)
SERPINE2Serpin family E member 2; Belongs to the serpin family. (409 aa)
PRPF19Pre-mRNA processing factor 19. (504 aa)
BMP2Bone morphogenetic protein 2. (396 aa)
IL6STInterleukin 6 signal transducer. (919 aa)
BIN1Bridging integrator 1. (593 aa)
NOTCH1Notch receptor 1. (2550 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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