STRINGSTRING
WHRN WHRN CDH23 CDH23 LHFPL5 LHFPL5 PCDH15 PCDH15 SCRIB SCRIB SOD1 SOD1 CLRN2 CLRN2 MYO7A MYO7A GRXCR2 GRXCR2 LRRC1 LRRC1 ENSCCAP00000023346 ENSCCAP00000023346 PDZD7 PDZD7 TPRN TPRN REST REST CLRN1 CLRN1 SEC24B SEC24B PLS1 PLS1 TRIOBP TRIOBP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WHRNWhirlin. (907 aa)
CDH23Cadherin related 23. (3359 aa)
LHFPL5LHFPL tetraspan subfamily member 5. (277 aa)
PCDH15Protocadherin related 15. (1958 aa)
SCRIBScribble planar cell polarity protein. (1655 aa)
SOD1Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (154 aa)
CLRN2Clarin 2. (232 aa)
MYO7AMyosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2166 aa)
GRXCR2Glutaredoxin and cysteine rich domain containing 2. (248 aa)
LRRC1Leucine rich repeat containing 1. (524 aa)
ENSCCAP00000023346Uncharacterized protein. (418 aa)
PDZD7PDZ domain containing 7. (1019 aa)
TPRNTaperin. (704 aa)
RESTRE1 silencing transcription factor. (1100 aa)
CLRN1Clarin 1. (245 aa)
SEC24BSEC24 homolog B, COPII coat complex component. (1244 aa)
PLS1Uncharacterized protein. (629 aa)
TRIOBPTRIO and F-actin binding protein. (2073 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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