29 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBS4	Bardet-Biedl syndrome 4. (494 aa)
	NTRK2	Tyrosine-protein kinase receptor. (838 aa)
	RPGRIP1	RPGR interacting protein 1. (1250 aa)
	NOTCH1	Notch receptor 1. (2550 aa)
	IHH	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (411 aa)
	NAGLU	N-acetyl-alpha-glucosaminidase. (742 aa)
	SOX9	SRY-box transcription factor 9. (509 aa)
	NRL	Neural retina leucine zipper. (237 aa)
	SDK2	Sidekick cell adhesion molecule 2. (2118 aa)
	THRB	Thyroid hormone receptor beta. (476 aa)
	PROM1	Prominin 1. (865 aa)
	TOPORS	TOP1 binding arginine/serine rich protein. (1081 aa)
	HCN1	Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (884 aa)
	GNAT2	G protein subunit alpha transducin 2. (354 aa)
	PDE6C	Phosphodiesterase. (858 aa)
	ROM1	Retinal outer segment membrane protein 1. (351 aa)
	LOC108298073	Uncharacterized protein. (985 aa)
	SOX8	SRY-box transcription factor 8. (446 aa)
	CNTF	Ciliary neurotrophic factor. (200 aa)
	RPGRIP1L	RPGRIP1 like. (1269 aa)
	STAT3	Signal transducer and activator of transcription. (770 aa)
	ENSCCAP00000018987	Uncharacterized protein. (699 aa)
	CABP4	Calcium binding protein 4. (272 aa)
	RORB	RAR related orphan receptor B. (470 aa)
	TTC8	Tetratricopeptide repeat domain 8. (515 aa)
	RP1	RP1 axonemal microtubule associated. (2030 aa)
	THY1	Thy-1 cell surface antigen. (161 aa)
	USH1C	USH1 protein network component harmonin. (899 aa)
	CRB2	Crumbs cell polarity complex component 2. (1291 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	RPGRIP1L	ENSCCAP00000014204	ENSCCAP00000017385	Bardet-Biedl syndrome 4.	RPGRIP1 like.	0.461
BBS4	TTC8	ENSCCAP00000014204	ENSCCAP00000021600	Bardet-Biedl syndrome 4.	Tetratricopeptide repeat domain 8.	0.989
CABP4	ROM1	ENSCCAP00000019247	ENSCCAP00000010917	Calcium binding protein 4.	Retinal outer segment membrane protein 1.	0.485
CABP4	RPGRIP1	ENSCCAP00000019247	ENSCCAP00000031556	Calcium binding protein 4.	RPGR interacting protein 1.	0.455
CNTF	NTRK2	ENSCCAP00000013833	ENSCCAP00000031390	Ciliary neurotrophic factor.	Tyrosine-protein kinase receptor.	0.405
CNTF	STAT3	ENSCCAP00000013833	ENSCCAP00000017914	Ciliary neurotrophic factor.	Signal transducer and activator of transcription.	0.525
GNAT2	PDE6C	ENSCCAP00000009273	ENSCCAP00000010559	G protein subunit alpha transducin 2.	Phosphodiesterase.	0.856
GNAT2	ROM1	ENSCCAP00000009273	ENSCCAP00000010917	G protein subunit alpha transducin 2.	Retinal outer segment membrane protein 1.	0.421
IHH	SOX9	ENSCCAP00000037086	ENSCCAP00000001761	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	SRY-box transcription factor 9.	0.472
NOTCH1	PROM1	ENSCCAP00000033380	ENSCCAP00000003801	Notch receptor 1.	Prominin 1.	0.432
NOTCH1	STAT3	ENSCCAP00000033380	ENSCCAP00000017914	Notch receptor 1.	Signal transducer and activator of transcription.	0.496
NTRK2	CNTF	ENSCCAP00000031390	ENSCCAP00000013833	Tyrosine-protein kinase receptor.	Ciliary neurotrophic factor.	0.405
PDE6C	GNAT2	ENSCCAP00000010559	ENSCCAP00000009273	Phosphodiesterase.	G protein subunit alpha transducin 2.	0.856
PDE6C	ROM1	ENSCCAP00000010559	ENSCCAP00000010917	Phosphodiesterase.	Retinal outer segment membrane protein 1.	0.539
PROM1	NOTCH1	ENSCCAP00000003801	ENSCCAP00000033380	Prominin 1.	Notch receptor 1.	0.432
PROM1	RPGRIP1	ENSCCAP00000003801	ENSCCAP00000031556	Prominin 1.	RPGR interacting protein 1.	0.501
ROM1	CABP4	ENSCCAP00000010917	ENSCCAP00000019247	Retinal outer segment membrane protein 1.	Calcium binding protein 4.	0.485
ROM1	GNAT2	ENSCCAP00000010917	ENSCCAP00000009273	Retinal outer segment membrane protein 1.	G protein subunit alpha transducin 2.	0.421
ROM1	PDE6C	ENSCCAP00000010917	ENSCCAP00000010559	Retinal outer segment membrane protein 1.	Phosphodiesterase.	0.539
RPGRIP1	CABP4	ENSCCAP00000031556	ENSCCAP00000019247	RPGR interacting protein 1.	Calcium binding protein 4.	0.455