STRINGSTRING
PDLIM4 PDLIM4 GRIN2B GRIN2B CHRDL1 CHRDL1 GRIN2D GRIN2D GRIN2C GRIN2C GRIN1 GRIN1 PVALB PVALB PTCHD1 PTCHD1 SHISA6 SHISA6 LOC108296551 LOC108296551
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDLIM4PDZ and LIM domain 4. (329 aa)
GRIN2BGlutamate ionotropic receptor NMDA type subunit 2B. (1483 aa)
CHRDL1Chordin like 1. (458 aa)
GRIN2DGlutamate ionotropic receptor NMDA type subunit 2D. (1336 aa)
GRIN2CGlutamate ionotropic receptor NMDA type subunit 2C. (1242 aa)
GRIN1Glutamate ionotropic receptor NMDA type subunit 1. (959 aa)
PVALBUncharacterized protein; Belongs to the parvalbumin family. (110 aa)
PTCHD1Patched domain containing 1. (888 aa)
SHISA6Shisa family member 6. (554 aa)
LOC108296551EF-hand domain-containing protein; Belongs to the parvalbumin family. (112 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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