16 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STAG2	Stromal antigen 2. (1242 aa)
	RAD21L1	RAD21 cohesin complex component like 1. (556 aa)
	ESPL1	Extra spindle pole bodies like 1, separase. (2102 aa)
	ENSCCAP00000009590	Rad21_Rec8 domain-containing protein. (546 aa)
	STAG3	Stromal antigen 3. (1247 aa)
	REC8	REC8 meiotic recombination protein. (548 aa)
	CTCF	CCCTC-binding factor. (676 aa)
	WAPL	WAPL cohesin release factor. (1191 aa)
	STAG1	Stromal antigen 1. (1267 aa)
	SMC1B	Structural maintenance of chromosomes protein. (1235 aa)
	LOC108290165	Uncharacterized protein. (600 aa)
	RAD21	RAD21 cohesin complex component. (605 aa)
	SMC3	Structural maintenance of chromosomes protein. (1215 aa)
	SMC1A	Structural maintenance of chromosomes protein. (1233 aa)
	SGO2	Shugoshin 2. (1259 aa)
	ENSCCAP00000015706	Uncharacterized protein. (131 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTCF	ENSCCAP00000009590	ENSCCAP00000000419	ENSCCAP00000009590	CCCTC-binding factor.	Rad21_Rec8 domain-containing protein.	0.820
CTCF	ENSCCAP00000015706	ENSCCAP00000000419	ENSCCAP00000015706	CCCTC-binding factor.	Uncharacterized protein.	0.536
CTCF	LOC108290165	ENSCCAP00000000419	ENSCCAP00000035553	CCCTC-binding factor.	Uncharacterized protein.	0.536
CTCF	RAD21	ENSCCAP00000000419	ENSCCAP00000034448	CCCTC-binding factor.	RAD21 cohesin complex component.	0.820
CTCF	RAD21L1	ENSCCAP00000000419	ENSCCAP00000012731	CCCTC-binding factor.	RAD21 cohesin complex component like 1.	0.748
CTCF	SMC1A	ENSCCAP00000000419	ENSCCAP00000031378	CCCTC-binding factor.	Structural maintenance of chromosomes protein.	0.614
CTCF	SMC3	ENSCCAP00000000419	ENSCCAP00000034356	CCCTC-binding factor.	Structural maintenance of chromosomes protein.	0.646
CTCF	STAG1	ENSCCAP00000000419	ENSCCAP00000039908	CCCTC-binding factor.	Stromal antigen 1.	0.742
CTCF	STAG2	ENSCCAP00000000419	ENSCCAP00000002453	CCCTC-binding factor.	Stromal antigen 2.	0.919
CTCF	STAG3	ENSCCAP00000000419	ENSCCAP00000005594	CCCTC-binding factor.	Stromal antigen 3.	0.666
CTCF	WAPL	ENSCCAP00000000419	ENSCCAP00000040267	CCCTC-binding factor.	WAPL cohesin release factor.	0.519
ENSCCAP00000009590	CTCF	ENSCCAP00000009590	ENSCCAP00000000419	Rad21_Rec8 domain-containing protein.	CCCTC-binding factor.	0.820
ENSCCAP00000009590	ENSCCAP00000015706	ENSCCAP00000009590	ENSCCAP00000015706	Rad21_Rec8 domain-containing protein.	Uncharacterized protein.	0.906
ENSCCAP00000009590	ESPL1	ENSCCAP00000009590	ENSCCAP00000014231	Rad21_Rec8 domain-containing protein.	Extra spindle pole bodies like 1, separase.	0.964
ENSCCAP00000009590	LOC108290165	ENSCCAP00000009590	ENSCCAP00000035553	Rad21_Rec8 domain-containing protein.	Uncharacterized protein.	0.906
ENSCCAP00000009590	REC8	ENSCCAP00000009590	ENSCCAP00000011813	Rad21_Rec8 domain-containing protein.	REC8 meiotic recombination protein.	0.773
ENSCCAP00000009590	SGO2	ENSCCAP00000009590	ENSCCAP00000028764	Rad21_Rec8 domain-containing protein.	Shugoshin 2.	0.578
ENSCCAP00000009590	SMC1A	ENSCCAP00000009590	ENSCCAP00000031378	Rad21_Rec8 domain-containing protein.	Structural maintenance of chromosomes protein.	0.995
ENSCCAP00000009590	SMC1B	ENSCCAP00000009590	ENSCCAP00000039735	Rad21_Rec8 domain-containing protein.	Structural maintenance of chromosomes protein.	0.990
ENSCCAP00000009590	SMC3	ENSCCAP00000009590	ENSCCAP00000034356	Rad21_Rec8 domain-containing protein.	Structural maintenance of chromosomes protein.	0.993