66 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GUCY2D	Guanylate cyclase. (1106 aa)
	GUCY2F	Guanylate cyclase. (1108 aa)
	GRK1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (535 aa)
	RP1L1	RP1 like 1. (2302 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)
	SLC24A4	Solute carrier family 24 member 4; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (622 aa)
	GRK7	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (553 aa)
	VCAN	Versican. (3397 aa)
	KIAA1549	KIAA1549. (1949 aa)
	RPGRIP1L	RPGRIP1 like. (1269 aa)
	RD3	Retinal degeneration 3, GUCY2D regulator. (195 aa)
	MERTK	Receptor protein-tyrosine kinase. (940 aa)
	ENSCCAP00000018987	Uncharacterized protein. (699 aa)
	PRCD	Photoreceptor disc component. (54 aa)
	GNGT1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (74 aa)
	GNAT1	G protein subunit alpha transducin 1. (350 aa)
	PPEF2	Serine/threonine-protein phosphatase with EF-hands. (753 aa)
	ARR3	Arrestin 3. (386 aa)
	ARL3	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (169 aa)
	MAK	Male germ cell associated kinase. (648 aa)
	GNAQ	G protein subunit alpha q. (359 aa)
	PDE6G	Phosphodiesterase 6G. (135 aa)
	NXNL1	Nucleoredoxin like 1. (212 aa)
	USH1G	USH1 protein network component sans. (461 aa)
	RP1	RP1 axonemal microtubule associated. (2030 aa)
	NTN1	Netrin 1. (604 aa)
	PCDH15	Protocadherin related 15. (1958 aa)
	TSGA10IP	Testis specific 10 interacting protein. (556 aa)
	SLC25A16	Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family. (333 aa)
	GUCA1C	Guanylate cyclase activator 1C. (208 aa)
	FAM161A	FAM161 centrosomal protein A. (715 aa)
	OPN4	Opsin 4. (495 aa)
	RPGRIP1	RPGR interacting protein 1. (1250 aa)
	ABCA4	ATP binding cassette subfamily A member 4. (2274 aa)
	GUCA1A	Uncharacterized protein. (207 aa)
	CEP250	Centrosomal protein 250. (2398 aa)
	GUCA1B	Guanylate cyclase activator 1B. (174 aa)
	PRPH2	Peripherin 2. (346 aa)
	PDE6B	Phosphodiesterase. (854 aa)
	MYO7A	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2166 aa)
	LGALS4	Galectin. (255 aa)
	NPHP1	Nephrocystin 1. (709 aa)
	PDE6A	Phosphodiesterase. (860 aa)
	ENSCCAP00000010551	Uncharacterized protein. (150 aa)
	LYAR	Ly1 antibody reactive. (329 aa)
	PDC	Phosducin. (246 aa)
	SPATA7	Spermatogenesis associated 7. (600 aa)
	CIB2	Uncharacterized protein. (187 aa)
	PPEF1	Protein phosphatase with EF-hand domain 1. (628 aa)
	DHRS3	Dehydrogenase/reductase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
	IFT20	Intraflagellar transport 20. (139 aa)
	TOPORS	TOP1 binding arginine/serine rich protein. (1081 aa)
	SAG	S-antigen visual arrestin. (404 aa)
	CFAP410	Cilia and flagella associated protein 410. (242 aa)
	IQCB1	IQ motif containing B1. (598 aa)
	CDHR1	Cadherin related family member 1. (859 aa)
	RCVRN	Recoverin. (199 aa)
	LOC108285014	Uncharacterized protein. (237 aa)
	LCA5	Lebercilin LCA5. (695 aa)
	GNAT2	G protein subunit alpha transducin 2. (354 aa)
	GRK4	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (578 aa)
	GNA11	G protein subunit alpha 11. (359 aa)
	TULP1	Tubby-like protein; Belongs to the TUB family. (542 aa)
	PDE6H	Phosphodiesterase 6H. (83 aa)
	RPGR	Retinitis pigmentosa GTPase regulator. (1131 aa)
	ROM1	Retinal outer segment membrane protein 1. (351 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA4	GUCY2D	ENSCCAP00000031993	ENSCCAP00000012477	ATP binding cassette subfamily A member 4.	Guanylate cyclase.	0.447
ABCA4	MAK	ENSCCAP00000031993	ENSCCAP00000022051	ATP binding cassette subfamily A member 4.	Male germ cell associated kinase.	0.437
ABCA4	MYO7A	ENSCCAP00000031993	ENSCCAP00000035931	ATP binding cassette subfamily A member 4.	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.521
ABCA4	NXNL1	ENSCCAP00000031993	ENSCCAP00000024079	ATP binding cassette subfamily A member 4.	Nucleoredoxin like 1.	0.525
ABCA4	PDE6B	ENSCCAP00000031993	ENSCCAP00000035886	ATP binding cassette subfamily A member 4.	Phosphodiesterase.	0.574
ABCA4	PRPH2	ENSCCAP00000031993	ENSCCAP00000034492	ATP binding cassette subfamily A member 4.	Peripherin 2.	0.609
ABCA4	ROM1	ENSCCAP00000031993	ENSCCAP00000010917	ATP binding cassette subfamily A member 4.	Retinal outer segment membrane protein 1.	0.631
ABCA4	RPGR	ENSCCAP00000031993	ENSCCAP00000010487	ATP binding cassette subfamily A member 4.	Retinitis pigmentosa GTPase regulator.	0.530
ABCA4	RPGRIP1	ENSCCAP00000031993	ENSCCAP00000031556	ATP binding cassette subfamily A member 4.	RPGR interacting protein 1.	0.501
ABCA4	TULP1	ENSCCAP00000031993	ENSCCAP00000010389	ATP binding cassette subfamily A member 4.	Tubby-like protein; Belongs to the TUB family.	0.439
ARL3	IFT20	ENSCCAP00000021451	ENSCCAP00000003899	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 20.	0.622
ARL3	IQCB1	ENSCCAP00000021451	ENSCCAP00000005087	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	IQ motif containing B1.	0.420
ARL3	NPHP1	ENSCCAP00000021451	ENSCCAP00000038796	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Nephrocystin 1.	0.418
ARL3	RPGRIP1L	ENSCCAP00000021451	ENSCCAP00000017385	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	RPGRIP1 like.	0.479
ARR3	GNAT1	ENSCCAP00000020831	ENSCCAP00000020073	Arrestin 3.	G protein subunit alpha transducin 1.	0.408
ARR3	GNAT2	ENSCCAP00000020831	ENSCCAP00000009273	Arrestin 3.	G protein subunit alpha transducin 2.	0.422
ARR3	GNGT1	ENSCCAP00000020831	ENSCCAP00000020003	Arrestin 3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.566
ARR3	GRK1	ENSCCAP00000020831	ENSCCAP00000013111	Arrestin 3.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.647
ARR3	GRK7	ENSCCAP00000020831	ENSCCAP00000016003	Arrestin 3.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.673
ARR3	GUCA1C	ENSCCAP00000020831	ENSCCAP00000029588	Arrestin 3.	Guanylate cyclase activator 1C.	0.620