(25 nodes) GABA-ergic synapse network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LRRTM2	Leucine rich repeat transmembrane neuronal 2. (517 aa)
	NLGN3	Neuroligin 3. (848 aa)
	LRFN5	Leucine rich repeat and fibronectin type III domain containing 5. (725 aa)
	BAIAP3	BAI1 associated protein 3. (1182 aa)
	MDGA1	MAM domain containing glycosylphosphatidylinositol anchor 1. (954 aa)
	TMEM132C	Transmembrane protein 132C. (1108 aa)
	ENSCCAP00000004257	COesterase domain-containing protein. (187 aa)
	NLGN1	Neuroligin 1. (823 aa)
	LRRTM1	Leucine rich repeat transmembrane neuronal 1. (522 aa)
	PCDH19	Protocadherin 19. (1145 aa)
	CLSTN3	Calsyntenin 3. (963 aa)
	LOC108295559	COesterase domain-containing protein. (607 aa)
	IGSF9B	Immunoglobulin superfamily member 9B. (1437 aa)
	SLC6A1	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (599 aa)
	ATP2B3	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1220 aa)
	NLGN2	Neuroligin 2. (835 aa)
	CBLN4	Cerebellin 4 precursor. (201 aa)
	PCDH17	Protocadherin 17. (1159 aa)
	CLSTN1	Calsyntenin 1. (951 aa)
	SLITRK2	SLIT and NTRK like family member 2. (845 aa)
	SLITRK1	SLIT and NTRK like family member 1. (696 aa)
	SLITRK3	SLIT and NTRK like family member 3. (972 aa)
	ATP2B2	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1243 aa)
	NRXN1	Neurexin 1. (1507 aa)
	TMEM132B	Transmembrane protein 132B. (589 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP2B2	ATP2B3	ENSCCAP00000030564	ENSCCAP00000019140	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.810
ATP2B3	ATP2B2	ENSCCAP00000019140	ENSCCAP00000030564	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.810
CLSTN3	LRRTM1	ENSCCAP00000007484	ENSCCAP00000004792	Calsyntenin 3.	Leucine rich repeat transmembrane neuronal 1.	0.616
ENSCCAP00000004257	LOC108295559	ENSCCAP00000004257	ENSCCAP00000011387	COesterase domain-containing protein.	COesterase domain-containing protein.	0.577
ENSCCAP00000004257	MDGA1	ENSCCAP00000004257	ENSCCAP00000003147	COesterase domain-containing protein.	MAM domain containing glycosylphosphatidylinositol anchor 1.	0.655
ENSCCAP00000004257	NLGN1	ENSCCAP00000004257	ENSCCAP00000004775	COesterase domain-containing protein.	Neuroligin 1.	0.547
ENSCCAP00000004257	NLGN2	ENSCCAP00000004257	ENSCCAP00000019459	COesterase domain-containing protein.	Neuroligin 2.	0.461
ENSCCAP00000004257	NLGN3	ENSCCAP00000004257	ENSCCAP00000001860	COesterase domain-containing protein.	Neuroligin 3.	0.530
ENSCCAP00000004257	NRXN1	ENSCCAP00000004257	ENSCCAP00000034605	COesterase domain-containing protein.	Neurexin 1.	0.978
ENSCCAP00000004257	SLITRK2	ENSCCAP00000004257	ENSCCAP00000027086	COesterase domain-containing protein.	SLIT and NTRK like family member 2.	0.438
IGSF9B	NLGN2	ENSCCAP00000013043	ENSCCAP00000019459	Immunoglobulin superfamily member 9B.	Neuroligin 2.	0.570
LOC108295559	ENSCCAP00000004257	ENSCCAP00000011387	ENSCCAP00000004257	COesterase domain-containing protein.	COesterase domain-containing protein.	0.577
LOC108295559	MDGA1	ENSCCAP00000011387	ENSCCAP00000003147	COesterase domain-containing protein.	MAM domain containing glycosylphosphatidylinositol anchor 1.	0.655
LOC108295559	NLGN1	ENSCCAP00000011387	ENSCCAP00000004775	COesterase domain-containing protein.	Neuroligin 1.	0.535
LOC108295559	NLGN2	ENSCCAP00000011387	ENSCCAP00000019459	COesterase domain-containing protein.	Neuroligin 2.	0.447
LOC108295559	NLGN3	ENSCCAP00000011387	ENSCCAP00000001860	COesterase domain-containing protein.	Neuroligin 3.	0.517
LOC108295559	NRXN1	ENSCCAP00000011387	ENSCCAP00000034605	COesterase domain-containing protein.	Neurexin 1.	0.978
LOC108295559	SLITRK2	ENSCCAP00000011387	ENSCCAP00000027086	COesterase domain-containing protein.	SLIT and NTRK like family member 2.	0.438
LRFN5	MDGA1	ENSCCAP00000002345	ENSCCAP00000003147	Leucine rich repeat and fibronectin type III domain containing 5.	MAM domain containing glycosylphosphatidylinositol anchor 1.	0.414
LRRTM1	CLSTN3	ENSCCAP00000004792	ENSCCAP00000007484	Leucine rich repeat transmembrane neuronal 1.	Calsyntenin 3.	0.616