9 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPART	Spartin. (660 aa)
	ULK3	Unc-51 like kinase 3. (480 aa)
	SNX15	Sorting nexin 15. (342 aa)
	VPS4A	Uncharacterized protein; Belongs to the AAA ATPase family. (437 aa)
	RPS6KL1	Ribosomal protein S6 kinase like 1. (544 aa)
	CAPN7	Calpain 7; Belongs to the peptidase C2 family. (813 aa)
	RPS6KC1	Ribosomal protein S6 kinase C1. (1065 aa)
	SPAST	Spastin; Belongs to the AAA ATPase family. (590 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (444 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS6KC1	SNX15	ENSCCAP00000012751	ENSCCAP00000037965	Ribosomal protein S6 kinase C1.	Sorting nexin 15.	0.458
SNX15	RPS6KC1	ENSCCAP00000037965	ENSCCAP00000012751	Sorting nexin 15.	Ribosomal protein S6 kinase C1.	0.458
SNX15	SPART	ENSCCAP00000037965	ENSCCAP00000033052	Sorting nexin 15.	Spartin.	0.641
SPART	SNX15	ENSCCAP00000033052	ENSCCAP00000037965	Spartin.	Sorting nexin 15.	0.641
SPAST	VPS4A	ENSCCAP00000011427	ENSCCAP00000037564	Spastin; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.481
SPAST	VPS4B	ENSCCAP00000011427	ENSCCAP00000011189	Spastin; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.481
VPS4A	SPAST	ENSCCAP00000037564	ENSCCAP00000011427	Uncharacterized protein; Belongs to the AAA ATPase family.	Spastin; Belongs to the AAA ATPase family.	0.481
VPS4A	VPS4B	ENSCCAP00000037564	ENSCCAP00000011189	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.984
VPS4B	SPAST	ENSCCAP00000011189	ENSCCAP00000011427	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Spastin; Belongs to the AAA ATPase family.	0.481
VPS4B	VPS4A	ENSCCAP00000011189	ENSCCAP00000037564	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.984