(13 nodes) CXC Chemokine domain network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108292198	C-X-C motif chemokine. (107 aa)
	CXCL11	C-X-C motif chemokine. (94 aa)
	CXCL9	C-X-C motif chemokine. (129 aa)
	PF4	C-X-C motif chemokine. (102 aa)
	CXCL10	C-X-C motif chemokine. (96 aa)
	LOC108292199	C-X-C motif chemokine. (102 aa)
	CXCL6	C-X-C motif chemokine. (115 aa)
	CXCL13	C-X-C motif chemokine ligand 13. (99 aa)
	PPBP	C-X-C motif chemokine. (128 aa)
	LOC108292194	C-X-C motif chemokine. (107 aa)
	CXCL12	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family. (119 aa)
	CXCL8	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family. (101 aa)
	CXCL5	C-X-C motif chemokine. (115 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CXCL10	CXCL11	ENSCCAP00000023782	ENSCCAP00000012894	C-X-C motif chemokine.	C-X-C motif chemokine.	0.977
CXCL10	CXCL12	ENSCCAP00000023782	ENSCCAP00000006844	C-X-C motif chemokine.	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	0.979
CXCL10	CXCL13	ENSCCAP00000023782	ENSCCAP00000038598	C-X-C motif chemokine.	C-X-C motif chemokine ligand 13.	0.947
CXCL10	CXCL5	ENSCCAP00000023782	ENSCCAP00000009355	C-X-C motif chemokine.	C-X-C motif chemokine.	0.814
CXCL10	CXCL6	ENSCCAP00000023782	ENSCCAP00000029350	C-X-C motif chemokine.	C-X-C motif chemokine.	0.961
CXCL10	CXCL8	ENSCCAP00000023782	ENSCCAP00000000372	C-X-C motif chemokine.	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.	0.669
CXCL10	CXCL9	ENSCCAP00000023782	ENSCCAP00000013320	C-X-C motif chemokine.	C-X-C motif chemokine.	0.999
CXCL10	LOC108292194	ENSCCAP00000023782	ENSCCAP00000007540	C-X-C motif chemokine.	C-X-C motif chemokine.	0.872
CXCL10	LOC108292198	ENSCCAP00000023782	ENSCCAP00000009543	C-X-C motif chemokine.	C-X-C motif chemokine.	0.872
CXCL10	LOC108292199	ENSCCAP00000023782	ENSCCAP00000026006	C-X-C motif chemokine.	C-X-C motif chemokine.	0.987
CXCL10	PF4	ENSCCAP00000023782	ENSCCAP00000019325	C-X-C motif chemokine.	C-X-C motif chemokine.	0.987
CXCL10	PPBP	ENSCCAP00000023782	ENSCCAP00000001378	C-X-C motif chemokine.	C-X-C motif chemokine.	0.975
CXCL11	CXCL10	ENSCCAP00000012894	ENSCCAP00000023782	C-X-C motif chemokine.	C-X-C motif chemokine.	0.977
CXCL11	CXCL12	ENSCCAP00000012894	ENSCCAP00000006844	C-X-C motif chemokine.	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	0.888
CXCL11	CXCL13	ENSCCAP00000012894	ENSCCAP00000038598	C-X-C motif chemokine.	C-X-C motif chemokine ligand 13.	0.943
CXCL11	CXCL5	ENSCCAP00000012894	ENSCCAP00000009355	C-X-C motif chemokine.	C-X-C motif chemokine.	0.671
CXCL11	CXCL6	ENSCCAP00000012894	ENSCCAP00000029350	C-X-C motif chemokine.	C-X-C motif chemokine.	0.529
CXCL11	CXCL8	ENSCCAP00000012894	ENSCCAP00000000372	C-X-C motif chemokine.	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.	0.477
CXCL11	CXCL9	ENSCCAP00000012894	ENSCCAP00000013320	C-X-C motif chemokine.	C-X-C motif chemokine.	0.954
CXCL11	LOC108292194	ENSCCAP00000012894	ENSCCAP00000007540	C-X-C motif chemokine.	C-X-C motif chemokine.	0.519