STRINGSTRING
ENSCCAP00000000829 ENSCCAP00000000829 LOC108318591 LOC108318591 CTR9 CTR9 EAF2 EAF2 POLR2D POLR2D GTF2F1 GTF2F1 EAF1 EAF1 ELOA ELOA POLR2F POLR2F POLR2C POLR2C ENSCCAP00000000379 ENSCCAP00000000379 POLR2L POLR2L POLR2H POLR2H SUPT4H1 SUPT4H1 ENSCCAP00000032998 ENSCCAP00000032998 CDK9 CDK9 ENSCCAP00000000187 ENSCCAP00000000187 SUPT5H SUPT5H MNAT1 MNAT1 ENSCCAP00000031590 ENSCCAP00000031590 IWS1 IWS1 SUPT16H SUPT16H ENSCCAP00000030858 ENSCCAP00000030858 NELFCD NELFCD GTF2H3 GTF2H3 LOC108310878 LOC108310878 NCBP1 NCBP1 LOC108307710 LOC108307710 NELFB NELFB CCNH CCNH GTF2H2 GTF2H2 PAF1 PAF1 SUPT6H SUPT6H WDR61 WDR61 GTF2H5 GTF2H5 AFF4 AFF4 CDK7 CDK7 SSRP1 SSRP1 CDC73 CDC73 POLR2J POLR2J GTF2H1 GTF2H1 ENSCCAP00000019805 ENSCCAP00000019805 AFF1 AFF1 RTF1 RTF1 MLLT1 MLLT1 LEO1 LEO1 POLR2B POLR2B POLR2E POLR2E NELFA NELFA NCBP2 NCBP2 CCNT2 CCNT2 LOC108297026 LOC108297026 ERCC3 ERCC3 CCNT1 CCNT1 ELOC ELOC CTDP1 CTDP1 POLR2I POLR2I GTF2H4 GTF2H4 POLR2A POLR2A GTF2F2 GTF2F2 MLLT3 MLLT3 ERCC2 ERCC2 ENSCCAP00000005168 ENSCCAP00000005168 ENSCCAP00000004889 ENSCCAP00000004889 CCNK CCNK POLR2K POLR2K TCEA1 TCEA1 ELL ELL ENSCCAP00000003201 ENSCCAP00000003201 NELFE NELFE ELOB ELOB LOC108293510 LOC108293510
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCCAP00000000829Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
LOC108318591Uncharacterized protein. (58 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
EAF2ELL associated factor 2. (283 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
EAF1ELL associated factor 1. (268 aa)
ELOAElongin A. (789 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
ENSCCAP00000000379Uncharacterized protein. (57 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
ENSCCAP00000032998General transcription factor IIH subunit. (384 aa)
CDK9Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (372 aa)
ENSCCAP00000000187Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
ENSCCAP00000031590TFIIS N-terminal domain-containing protein. (499 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (819 aa)
SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit. (905 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
NELFCDNegative elongation factor complex member C/D. (599 aa)
GTF2H3General transcription factor IIH subunit 3. (287 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
NELFBNegative elongation factor complex member B. (698 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (529 aa)
SUPT6HTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
WDR61WD repeat domain 61. (305 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
AFF4AF4/FMR2 family member 4. (1163 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (708 aa)
CDC73Cell division cycle 73. (531 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (185 aa)
GTF2H1General transcription factor IIH subunit 1. (555 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
AFF1AF4/FMR2 family member 1. (1169 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (643 aa)
MLLT1MLLT1 super elongation complex subunit. (614 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2ERNA polymerase II subunit E. (227 aa)
NELFANegative elongation factor complex member A. (539 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (163 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (730 aa)
LOC108297026Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
CCNT1Cyclin T1; Belongs to the cyclin family. (730 aa)
ELOCElongin C. (112 aa)
CTDP1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (964 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
MLLT3MLLT3 super elongation complex subunit. (569 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (770 aa)
ENSCCAP00000005168Uncharacterized protein. (98 aa)
ENSCCAP00000004889Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
CCNKCyclin K; Belongs to the cyclin family. (551 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
TCEA1Transcription elongation factor A1. (262 aa)
ELLElongation factor for RNA polymerase II. (621 aa)
ENSCCAP00000003201Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
NELFENegative elongation factor complex member E. (391 aa)
ELOBElongin B. (157 aa)
LOC108293510Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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