STRINGSTRING
ENSCCAP00000000379 ENSCCAP00000000379 LOC108318591 LOC108318591 NELFE NELFE POLR2K POLR2K ERCC2 ERCC2 GTF2F2 GTF2F2 C6orf15 C6orf15 POLR2A POLR2A GTF2H4 GTF2H4 POLR2I POLR2I CTDP1 CTDP1 ERCC3 ERCC3 NCBP2 NCBP2 NELFA NELFA POLR2E POLR2E POLR2B POLR2B ENSCCAP00000019805 ENSCCAP00000019805 GTF2H1 GTF2H1 POLR2J POLR2J CDK7 CDK7 GTF2H5 GTF2H5 GTF2H2 GTF2H2 CCNH CCNH NELFB NELFB LOC108307710 LOC108307710 NCBP1 NCBP1 LOC108310878 LOC108310878 GTF2H3 GTF2H3 NELFCD NELFCD ENSCCAP00000030858 ENSCCAP00000030858 MNAT1 MNAT1 SUPT5H SUPT5H ENSCCAP00000032998 ENSCCAP00000032998 SUPT4H1 SUPT4H1 POLR2H POLR2H POLR2L POLR2L POLR2C POLR2C UPK3BL2 UPK3BL2 POLR2F POLR2F GTF2F1 GTF2F1 POLR2D POLR2D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCCAP00000000379Uncharacterized protein. (57 aa)
LOC108318591Uncharacterized protein. (58 aa)
NELFENegative elongation factor complex member E. (391 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (770 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
C6orf15Chromosome 6 open reading frame 15. (303 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CTDP1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (964 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (163 aa)
NELFANegative elongation factor complex member A. (539 aa)
POLR2ERNA polymerase II subunit E. (227 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
GTF2H1General transcription factor IIH subunit 1. (555 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (185 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
NELFBNegative elongation factor complex member B. (698 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
GTF2H3General transcription factor IIH subunit 3. (287 aa)
NELFCDNegative elongation factor complex member C/D. (599 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
ENSCCAP00000032998General transcription factor IIH subunit. (384 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
UPK3BL2Uncharacterized protein. (266 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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