STRINGSTRING
RPA1 RPA1 ENSCCAP00000002159 ENSCCAP00000002159 MRE11 MRE11 ENSCCAP00000002896 ENSCCAP00000002896 ENSCCAP00000003507 ENSCCAP00000003507 ATRIP ATRIP RBBP8 RBBP8 ERCC1 ERCC1 LOC108301415 LOC108301415 BARD1 BARD1 EXO1 EXO1 RAD51 RAD51 DNA2 DNA2 BLM BLM WRN WRN TDRD3 TDRD3 ABL1 ABL1 SLF1 SLF1 RCBTB1 RCBTB1 BRIP1 BRIP1 RPA3 RPA3 MEIOB MEIOB ENSCCAP00000016251 ENSCCAP00000016251 BRCA1 BRCA1 ATM ATM ENSCCAP00000022407 ENSCCAP00000022407 RCBTB2 RCBTB2 RAD1 RAD1 RHNO1 RHNO1 RFC4 RFC4 TOP3A TOP3A RAD9A RAD9A EXD2 EXD2 ENSCCAP00000028938 ENSCCAP00000028938 ERCC4 ERCC4 TOPBP1 TOPBP1 CDCA7 CDCA7 KAT5 KAT5 NBN NBN HUS1 HUS1 RECQL4 RECQL4 RAD52 RAD52 RAD9B RAD9B RFC2 RFC2 RAD50 RAD50 ATR ATR RAD17 RAD17 LOC108300233 LOC108300233 RFC3 RFC3 RFC5 RFC5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (557 aa)
ENSCCAP00000002159Rep_fac_C domain-containing protein. (306 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (709 aa)
ENSCCAP00000002896Uncharacterized protein. (240 aa)
ENSCCAP00000003507Uncharacterized protein. (78 aa)
ATRIPATR interacting protein. (790 aa)
RBBP8RB binding protein 8, endonuclease. (899 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (298 aa)
LOC108301415Uncharacterized protein. (111 aa)
BARD1BRCA1 associated RING domain 1. (778 aa)
EXO1Exonuclease 1. (847 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
DNA2DNA replication helicase/nuclease 2. (1060 aa)
BLMBLM RecQ like helicase. (1401 aa)
WRNWRN RecQ like helicase. (1431 aa)
TDRD3Tudor domain containing 3. (744 aa)
ABL1Tyrosine-protein kinase. (1149 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1058 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1212 aa)
RPA3Uncharacterized protein. (121 aa)
MEIOBMeiosis specific with OB-fold. (455 aa)
ENSCCAP00000016251Uncharacterized protein. (107 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1830 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3000 aa)
ENSCCAP00000022407Uncharacterized protein. (67 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (556 aa)
RAD1RAD1 checkpoint DNA exonuclease. (282 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (239 aa)
RFC4Replication factor C subunit 4. (363 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1001 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (391 aa)
EXD2Exonuclease 3'-5' domain containing 2. (621 aa)
ENSCCAP00000028938Uncharacterized protein. (79 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
TOPBP1DNA topoisomerase II binding protein 1. (1526 aa)
CDCA7zf-4CXXC_R1 domain-containing protein. (450 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (546 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (753 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (280 aa)
RECQL4RecQ like helicase 4. (1211 aa)
RAD52RAD52 homolog, DNA repair protein. (419 aa)
RAD9BRAD9 checkpoint clamp component B. (345 aa)
RFC2Rep_fac_C domain-containing protein. (209 aa)
RAD50Zinc-hook domain-containing protein. (1312 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2644 aa)
RAD17RAD17 checkpoint clamp loader component. (713 aa)
LOC108300233Uncharacterized protein. (147 aa)
RFC3Replication factor C subunit 3. (236 aa)
RFC5Replication factor C subunit 5. (387 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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