STRINGSTRING
POLR2J POLR2J POLR2D POLR2D GTF2F1 GTF2F1 POLR2F POLR2F UPK3BL2 UPK3BL2 POLR2C POLR2C POLR2L POLR2L POLR2H POLR2H ENSCCAP00000032998 ENSCCAP00000032998 SUPT5H SUPT5H MNAT1 MNAT1 ENSCCAP00000030858 ENSCCAP00000030858 GTF2H3 GTF2H3 LOC108310878 LOC108310878 NCBP1 NCBP1 LOC108307710 LOC108307710 CCNH CCNH GTF2H2 GTF2H2 RNGTT RNGTT GTF2H5 GTF2H5 CDK7 CDK7 GTF2H1 GTF2H1 RNMT RNMT ENSCCAP00000019805 ENSCCAP00000019805 POLR2B POLR2B POLR2E POLR2E NCBP2 NCBP2 ERCC3 ERCC3 POLR2I POLR2I GTF2H4 GTF2H4 POLR2A POLR2A C6orf15 C6orf15 GTF2F2 GTF2F2 ERCC2 ERCC2 DUSP11 DUSP11 POLR2K POLR2K LOC108318591 LOC108318591 ENSCCAP00000000379 ENSCCAP00000000379
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLR2JRNA_pol_L_2 domain-containing protein. (185 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
UPK3BL2Uncharacterized protein. (266 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSCCAP00000032998General transcription factor IIH subunit. (384 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
GTF2H3General transcription factor IIH subunit 3. (287 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
RNGTTPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (597 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
GTF2H1General transcription factor IIH subunit 1. (555 aa)
RNMTmRNA cap guanine-N7 methyltransferase. (464 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2ERNA polymerase II subunit E. (227 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (163 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
C6orf15Chromosome 6 open reading frame 15. (303 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (770 aa)
DUSP11Dual specificity phosphatase 11. (327 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
LOC108318591Uncharacterized protein. (58 aa)
ENSCCAP00000000379Uncharacterized protein. (57 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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