STRINGSTRING
ENSCCAP00000000187 ENSCCAP00000000187 ENSCCAP00000000379 ENSCCAP00000000379 LOC108318591 LOC108318591 ENSCCAP00000000829 ENSCCAP00000000829 LOC108293510 LOC108293510 ELOB ELOB CINP CINP NELFE NELFE ENSCCAP00000003201 ENSCCAP00000003201 ELL ELL TCEA1 TCEA1 POLR2K POLR2K CCNK CCNK ENSCCAP00000004889 ENSCCAP00000004889 ENSCCAP00000005168 ENSCCAP00000005168 ERCC2 ERCC2 MLLT3 MLLT3 GTF2F2 GTF2F2 C6orf15 C6orf15 POLR2A POLR2A GTF2H4 GTF2H4 POLR2I POLR2I CTDP1 CTDP1 ELOC ELOC CCNT1 CCNT1 ERCC3 ERCC3 LOC108297026 LOC108297026 CCNT2 CCNT2 NCBP2 NCBP2 NELFA NELFA POLR2E POLR2E POLR2B POLR2B LEO1 LEO1 MLLT1 MLLT1 RTF1 RTF1 AFF1 AFF1 ENSCCAP00000019805 ENSCCAP00000019805 GTF2H1 GTF2H1 TCEA3 TCEA3 POLR2J POLR2J CDC73 CDC73 SSRP1 SSRP1 CDK7 CDK7 CCNQ CCNQ AFF4 AFF4 GTF2H5 GTF2H5 WDR61 WDR61 TCEANC TCEANC SUPT6H SUPT6H PAF1 PAF1 GTF2H2 GTF2H2 CCNH CCNH NELFB NELFB LOC108307710 LOC108307710 NCBP1 NCBP1 TCEA2 TCEA2 LOC108310878 LOC108310878 GTF2H3 GTF2H3 NELFCD NELFCD ENSCCAP00000030858 ENSCCAP00000030858 SUPT16H SUPT16H IWS1 IWS1 ENSCCAP00000031590 ENSCCAP00000031590 MNAT1 MNAT1 SUPT5H SUPT5H CDK9 CDK9 ENSCCAP00000032998 ENSCCAP00000032998 SLC39A13 SLC39A13 SUPT4H1 SUPT4H1 POLR2H POLR2H PRF1 PRF1 POLR2L POLR2L POLR2C POLR2C UPK3BL2 UPK3BL2 POLR2F POLR2F ELOA ELOA TCEANC2 TCEANC2 EAF1 EAF1 GTF2F1 GTF2F1 POLR2D POLR2D EAF2 EAF2 CTR9 CTR9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCCAP00000000187Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
ENSCCAP00000000379Uncharacterized protein. (57 aa)
LOC108318591Uncharacterized protein. (58 aa)
ENSCCAP00000000829Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
LOC108293510Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
ELOBElongin B. (157 aa)
CINPCyclin dependent kinase 2 interacting protein. (217 aa)
NELFENegative elongation factor complex member E. (391 aa)
ENSCCAP00000003201Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
ELLElongation factor for RNA polymerase II. (621 aa)
TCEA1Transcription elongation factor A1. (262 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
CCNKCyclin K; Belongs to the cyclin family. (551 aa)
ENSCCAP00000004889Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
ENSCCAP00000005168Uncharacterized protein. (98 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (770 aa)
MLLT3MLLT3 super elongation complex subunit. (569 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
C6orf15Chromosome 6 open reading frame 15. (303 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CTDP1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (964 aa)
ELOCElongin C. (112 aa)
CCNT1Cyclin T1; Belongs to the cyclin family. (730 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
LOC108297026Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (730 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (163 aa)
NELFANegative elongation factor complex member A. (539 aa)
POLR2ERNA polymerase II subunit E. (227 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
MLLT1MLLT1 super elongation complex subunit. (614 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (643 aa)
AFF1AF4/FMR2 family member 1. (1169 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
GTF2H1General transcription factor IIH subunit 1. (555 aa)
TCEA3Transcription elongation factor A3. (348 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (185 aa)
CDC73Cell division cycle 73. (531 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (708 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
CCNQCYCLIN domain-containing protein; Belongs to the cyclin family. (243 aa)
AFF4AF4/FMR2 family member 4. (1163 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
WDR61WD repeat domain 61. (305 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (378 aa)
SUPT6HTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (529 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
NELFBNegative elongation factor complex member B. (698 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
TCEA2Transcription elongation factor A2. (299 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
GTF2H3General transcription factor IIH subunit 3. (287 aa)
NELFCDNegative elongation factor complex member C/D. (599 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit. (905 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (819 aa)
ENSCCAP00000031590TFIIS N-terminal domain-containing protein. (499 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
CDK9Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (372 aa)
ENSCCAP00000032998General transcription factor IIH subunit. (384 aa)
SLC39A13Solute carrier family 39 member 13. (368 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
PRF1Perforin 1. (555 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
UPK3BL2Uncharacterized protein. (266 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
ELOAElongin A. (789 aa)
TCEANC2Transcription elongation factor A N-terminal and central domain containing 2. (208 aa)
EAF1ELL associated factor 1. (268 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
EAF2ELL associated factor 2. (283 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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