STRINGSTRING
ENSCCAP00000013232 ENSCCAP00000013232 POLR2D POLR2D TBPL1 TBPL1 TAF12 TAF12 GTF2F1 GTF2F1 TAF7L TAF7L POLR2F POLR2F TAF15 TAF15 UPK3BL2 UPK3BL2 ENSCCAP00000000291 ENSCCAP00000000291 ENSCCAP00000000379 ENSCCAP00000000379 LOC108318591 LOC108318591 GTF2E2 GTF2E2 TAF13 TAF13 POLR2K POLR2K TAF4 TAF4 ERCC2 ERCC2 GTF2F2 GTF2F2 POLR2A POLR2A GTF2H4 GTF2H4 POLR2I POLR2I LOC108299500 LOC108299500 TAF6 TAF6 TAF2 TAF2 POLR2C POLR2C TAF3 TAF3 POLR2L POLR2L POLR2H POLR2H ENSCCAP00000032998 ENSCCAP00000032998 TAF10 TAF10 MNAT1 MNAT1 C11orf88 C11orf88 GTF2A1 GTF2A1 TAF4B TAF4B ENSCCAP00000030858 ENSCCAP00000030858 GTF2H3 GTF2H3 LOC108310878 LOC108310878 LOC108307710 LOC108307710 CCNH CCNH GTF2H2 GTF2H2 GTF2H5 GTF2H5 ENSCCAP00000024134 ENSCCAP00000024134 CDK7 CDK7 POLR2J POLR2J GTF2H1 GTF2H1 ENSCCAP00000019805 ENSCCAP00000019805 GTF2A2 GTF2A2 TAF1 TAF1 TAF11 TAF11 TAF9B TAF9B ENSCCAP00000017342 ENSCCAP00000017342 TAF5 TAF5 GTF2E1 GTF2E1 TBP TBP GTF2A1L GTF2A1L POLR2B POLR2B POLR2E POLR2E GTF2B GTF2B ERCC3 ERCC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCCAP00000013232Uncharacterized protein. (264 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
TAF12TATA-box binding protein associated factor 12. (213 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
TAF7LTATA-box binding protein associated factor 7 like. (463 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
TAF15TATA-box binding protein associated factor 15. (561 aa)
UPK3BL2Uncharacterized protein. (266 aa)
ENSCCAP00000000291Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (91 aa)
ENSCCAP00000000379Uncharacterized protein. (57 aa)
LOC108318591Uncharacterized protein. (58 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
TAF4TATA-box binding protein associated factor 4. (712 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (770 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
LOC108299500Uncharacterized protein. (246 aa)
TAF6TATA-box binding protein associated factor 6. (713 aa)
TAF2TATA-box binding protein associated factor 2. (1199 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
TAF3TATA-box binding protein associated factor 3. (931 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSCCAP00000032998General transcription factor IIH subunit. (384 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
C11orf88Chromosome 11 open reading frame 88. (195 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
TAF4BTATA-box binding protein associated factor 4b. (861 aa)
ENSCCAP00000030858S1 domain-containing protein. (182 aa)
GTF2H3General transcription factor IIH subunit 3. (287 aa)
LOC108310878Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (449 aa)
LOC108307710DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
ENSCCAP00000024134Uncharacterized protein. (120 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (185 aa)
GTF2H1General transcription factor IIH subunit 1. (555 aa)
ENSCCAP00000019805Uncharacterized protein. (54 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
TAF1Transcription initiation factor TFIID subunit. (1927 aa)
TAF11TATA-box binding protein associated factor 11. (211 aa)
TAF9BTATA-box binding protein associated factor 9b. (251 aa)
ENSCCAP00000017342TFIIA_gamma_N domain-containing protein. (81 aa)
TAF5TATA-box binding protein associated factor 5. (800 aa)
GTF2E1General transcription factor IIE subunit 1. (342 aa)
TBPTATA-box binding protein. (329 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (477 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2ERNA polymerase II subunit E. (227 aa)
GTF2BGeneral transcription factor IIB. (316 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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