(32 nodes) Other glycan degradation network (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HEXA	Beta-hexosaminidase. (529 aa)
	FAM149A	Family with sequence similarity 149 member A. (480 aa)
	ZBTB8B	Uncharacterized protein. (495 aa)
	HEXD	Hexosaminidase D. (550 aa)
	MAN2B2	Alpha-mannosidase. (1009 aa)
	TMEM130	Transmembrane protein 130. (435 aa)
	BOD1L1	Biorientation of chromosomes in cell division 1 like 1. (3004 aa)
	GLB1L3	Beta-galactosidase. (653 aa)
	AGA	Aspartylglucosaminidase. (346 aa)
	GLB1L	Galactosidase beta 1 like; Belongs to the glycosyl hydrolase 35 family. (652 aa)
	LOC108307733	Uncharacterized protein. (186 aa)
	BOD1L2	Biorientation of chromosomes in cell division 1 like 2. (177 aa)
	ENGASE	Endo-beta-N-acetylglucosaminidase. (740 aa)
	ENSCCAP00000033742	Uncharacterized protein. (145 aa)
	MAN2C1	Mannosidase alpha class 2C member 1. (1042 aa)
	FUCA2	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (465 aa)
	FAM149B1	Family with sequence similarity 149 member B1. (582 aa)
	GLB1	Beta-galactosidase. (657 aa)
	NEU4	Neuraminidase 4. (479 aa)
	CCNB1IP1	RING-type domain-containing protein. (277 aa)
	HEXB	Beta-hexosaminidase. (553 aa)
	NEU1	Neuraminidase 1. (345 aa)
	GBA	Glucosylceramidase. (536 aa)
	MANBA	Mannosidase beta. (879 aa)
	ENSCCAP00000024677	RING-type domain-containing protein. (259 aa)
	NEU3	Neuraminidase 3. (461 aa)
	GBA2	Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. (923 aa)
	FUCA1	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (424 aa)
	BOD1	Uncharacterized protein. (185 aa)
	GLB1L2	Beta-galactosidase. (636 aa)
	MAN2B1	Alpha-mannosidase. (1027 aa)
	NEU2	Neuraminidase 2. (379 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BOD1	NEU1	ENSCCAP00000026972	ENSCCAP00000017534	Uncharacterized protein.	Neuraminidase 1.	0.611
BOD1	NEU4	ENSCCAP00000026972	ENSCCAP00000039742	Uncharacterized protein.	Neuraminidase 4.	0.464
BOD1L1	NEU1	ENSCCAP00000006659	ENSCCAP00000017534	Biorientation of chromosomes in cell division 1 like 1.	Neuraminidase 1.	0.611
BOD1L1	NEU4	ENSCCAP00000006659	ENSCCAP00000039742	Biorientation of chromosomes in cell division 1 like 1.	Neuraminidase 4.	0.464
BOD1L2	NEU1	ENSCCAP00000000620	ENSCCAP00000017534	Biorientation of chromosomes in cell division 1 like 2.	Neuraminidase 1.	0.611
BOD1L2	NEU4	ENSCCAP00000000620	ENSCCAP00000039742	Biorientation of chromosomes in cell division 1 like 2.	Neuraminidase 4.	0.464
CCNB1IP1	MAN2C1	ENSCCAP00000013446	ENSCCAP00000033802	RING-type domain-containing protein.	Mannosidase alpha class 2C member 1.	0.579
CCNB1IP1	MANBA	ENSCCAP00000013446	ENSCCAP00000022068	RING-type domain-containing protein.	Mannosidase beta.	0.411
ENGASE	FUCA1	ENSCCAP00000000013	ENSCCAP00000026863	Endo-beta-N-acetylglucosaminidase.	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.	0.639
ENGASE	FUCA2	ENSCCAP00000000013	ENSCCAP00000035014	Endo-beta-N-acetylglucosaminidase.	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.	0.638
ENGASE	MAN2C1	ENSCCAP00000000013	ENSCCAP00000033802	Endo-beta-N-acetylglucosaminidase.	Mannosidase alpha class 2C member 1.	0.802
ENSCCAP00000024677	MAN2C1	ENSCCAP00000024677	ENSCCAP00000033802	RING-type domain-containing protein.	Mannosidase alpha class 2C member 1.	0.579
ENSCCAP00000024677	MANBA	ENSCCAP00000024677	ENSCCAP00000022068	RING-type domain-containing protein.	Mannosidase beta.	0.411
FAM149A	HEXD	ENSCCAP00000029772	ENSCCAP00000032704	Family with sequence similarity 149 member A.	Hexosaminidase D.	0.574
FAM149A	MANBA	ENSCCAP00000029772	ENSCCAP00000022068	Family with sequence similarity 149 member A.	Mannosidase beta.	0.462
FAM149A	NEU1	ENSCCAP00000029772	ENSCCAP00000017534	Family with sequence similarity 149 member A.	Neuraminidase 1.	0.529
FAM149B1	HEXD	ENSCCAP00000035555	ENSCCAP00000032704	Family with sequence similarity 149 member B1.	Hexosaminidase D.	0.574
FAM149B1	MANBA	ENSCCAP00000035555	ENSCCAP00000022068	Family with sequence similarity 149 member B1.	Mannosidase beta.	0.462
FAM149B1	NEU1	ENSCCAP00000035555	ENSCCAP00000017534	Family with sequence similarity 149 member B1.	Neuraminidase 1.	0.529
FUCA1	ENGASE	ENSCCAP00000026863	ENSCCAP00000000013	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.	Endo-beta-N-acetylglucosaminidase.	0.639