48 items (Cebus capucinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCCAP00000025788	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (131 aa)
	SLC27A4	Solute carrier family 27 member 4. (643 aa)
	PLA2G2D	Phospholipase A(2). (146 aa)
	GOT2	Aspartate aminotransferase. (430 aa)
	PNLIPRP2	Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family. (469 aa)
	CD36	CD36 molecule; Belongs to the CD36 family. (476 aa)
	MOGAT2	Monoacylglycerol O-acyltransferase 2. (334 aa)
	PLA2G2E	Phospholipase A(2). (142 aa)
	ACAT2	Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	AGPAT1	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (285 aa)
	PLA2G10	Phospholipase A(2). (166 aa)
	PLA2G3	Phospholipase A2 group III. (509 aa)
	PLPP1	Phospholipid phosphatase 1. (284 aa)
	ENSCCAP00000038965	acidPPc domain-containing protein. (275 aa)
	PLA2G2F	Phospholipase A(2). (211 aa)
	ABCG5	ATP binding cassette subfamily G member 5. (651 aa)
	PLPP3	acidPPc domain-containing protein. (311 aa)
	PLA2G12A	Phospholipase A2 group XIIA. (189 aa)
	SLC27A1	Solute carrier family 27 member 1. (646 aa)
	ABCG8	ATP binding cassette subfamily G member 8. (673 aa)
	LOC108281866	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (124 aa)
	FABP1	Fatty acid binding protein 1. (127 aa)
	NPC1L1	NPC1 like intracellular cholesterol transporter 1. (1330 aa)
	LIPK	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (398 aa)
	APOB	Apolipoprotein B. (4545 aa)
	LIPF	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (408 aa)
	PNLIPRP1	Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family. (467 aa)
	PLA2G2A	Phospholipase A(2). (144 aa)
	CLPSL1	Colipase like 1. (119 aa)
	ENSCCAP00000011298	acidPPc domain-containing protein. (237 aa)
	ACAT1	Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
	CLPS	Colipase. (112 aa)
	CEL	Carboxyl ester lipase. (472 aa)
	APOA1	Apolipoprotein A1. (267 aa)
	PLA2G12B	Phospholipase A2 group XIIB. (195 aa)
	MOGAT3	Monoacylglycerol O-acyltransferase 3. (341 aa)
	DGAT2	Diacylglycerol O-acyltransferase 2. (382 aa)
	PLA2G5	Phospholipase A(2). (138 aa)
	APOA4	Apolipoprotein A4. (399 aa)
	ENSCCAP00000019674	acidPPc domain-containing protein. (287 aa)
	AGPAT2	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (278 aa)
	MTTP	Microsomal triglyceride transfer protein. (894 aa)
	DGAT1	O-acyltransferase. (493 aa)
	PNLIP	Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family. (465 aa)
	LIPJ	Lipase family member J. (364 aa)
	SCARB1	Scavenger receptor class B member 1; Belongs to the CD36 family. (563 aa)
	PLA2G1B	Phospholipase A(2). (70 aa)
	ABCA1	ATP binding cassette subfamily A member 1. (2258 aa)

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA1	APOA1	ENSCCAP00000040411	ENSCCAP00000013613	ATP binding cassette subfamily A member 1.	Apolipoprotein A1.	0.774
ABCA1	APOB	ENSCCAP00000040411	ENSCCAP00000006798	ATP binding cassette subfamily A member 1.	Apolipoprotein B.	0.779
ABCA1	CD36	ENSCCAP00000040411	ENSCCAP00000029577	ATP binding cassette subfamily A member 1.	CD36 molecule; Belongs to the CD36 family.	0.578
ABCA1	MTTP	ENSCCAP00000040411	ENSCCAP00000021511	ATP binding cassette subfamily A member 1.	Microsomal triglyceride transfer protein.	0.490
ABCA1	NPC1L1	ENSCCAP00000040411	ENSCCAP00000003291	ATP binding cassette subfamily A member 1.	NPC1 like intracellular cholesterol transporter 1.	0.664
ABCA1	SCARB1	ENSCCAP00000040411	ENSCCAP00000023991	ATP binding cassette subfamily A member 1.	Scavenger receptor class B member 1; Belongs to the CD36 family.	0.590
ABCG5	ABCG8	ENSCCAP00000000080	ENSCCAP00000001549	ATP binding cassette subfamily G member 5.	ATP binding cassette subfamily G member 8.	0.999
ABCG5	APOB	ENSCCAP00000000080	ENSCCAP00000006798	ATP binding cassette subfamily G member 5.	Apolipoprotein B.	0.419
ABCG5	MTTP	ENSCCAP00000000080	ENSCCAP00000021511	ATP binding cassette subfamily G member 5.	Microsomal triglyceride transfer protein.	0.420
ABCG5	NPC1L1	ENSCCAP00000000080	ENSCCAP00000003291	ATP binding cassette subfamily G member 5.	NPC1 like intracellular cholesterol transporter 1.	0.747
ABCG5	SCARB1	ENSCCAP00000000080	ENSCCAP00000023991	ATP binding cassette subfamily G member 5.	Scavenger receptor class B member 1; Belongs to the CD36 family.	0.526
ABCG8	ABCG5	ENSCCAP00000001549	ENSCCAP00000000080	ATP binding cassette subfamily G member 8.	ATP binding cassette subfamily G member 5.	0.999
ABCG8	NPC1L1	ENSCCAP00000001549	ENSCCAP00000003291	ATP binding cassette subfamily G member 8.	NPC1 like intracellular cholesterol transporter 1.	0.708
ABCG8	SCARB1	ENSCCAP00000001549	ENSCCAP00000023991	ATP binding cassette subfamily G member 8.	Scavenger receptor class B member 1; Belongs to the CD36 family.	0.501
ACAT1	ACAT2	ENSCCAP00000011902	ENSCCAP00000032091	Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.897
ACAT1	SLC27A1	ENSCCAP00000011902	ENSCCAP00000001433	Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Solute carrier family 27 member 1.	0.427
ACAT2	ACAT1	ENSCCAP00000032091	ENSCCAP00000011902	Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	0.897
ACAT2	SLC27A1	ENSCCAP00000032091	ENSCCAP00000001433	Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.	Solute carrier family 27 member 1.	0.427
AGPAT1	AGPAT2	ENSCCAP00000033730	ENSCCAP00000021343	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.943
AGPAT1	DGAT1	ENSCCAP00000033730	ENSCCAP00000021631	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	O-acyltransferase.	0.447