14 items (Cercocebus atys) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WRN	WRN RecQ like helicase. (1418 aa)
	BLM	BLM RecQ like helicase. (1416 aa)
	LOC105587074	Uncharacterized protein. (186 aa)
	ENSCATP00000045432	Uncharacterized protein. (173 aa)
	ENSCATP00000003010	Uncharacterized protein. (189 aa)
	MEN1	Menin 1. (615 aa)
	HMGB1	High mobility group box 1. (215 aa)
	ENSCATP00000008212	Uncharacterized protein. (145 aa)
	ENSCATP00000013533	Uncharacterized protein. (215 aa)
	GEN1	GEN1 Holliday junction 5' flap endonuclease. (910 aa)
	ENSCATP00000000678	Uncharacterized protein. (211 aa)
	HMGB3	Uncharacterized protein. (210 aa)
	FANCM	FA complementation group M. (2050 aa)
	ABL1	Tyrosine-protein kinase. (1149 aa)

Your Current Organism:

Cercocebus atys

NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLM	FANCM	ENSCATP00000035511	ENSCATP00000014720	BLM RecQ like helicase.	FA complementation group M.	0.998
BLM	GEN1	ENSCATP00000035511	ENSCATP00000000478	BLM RecQ like helicase.	GEN1 Holliday junction 5' flap endonuclease.	0.782
BLM	WRN	ENSCATP00000035511	ENSCATP00000035398	BLM RecQ like helicase.	WRN RecQ like helicase.	0.684
FANCM	BLM	ENSCATP00000014720	ENSCATP00000035511	FA complementation group M.	BLM RecQ like helicase.	0.998
FANCM	GEN1	ENSCATP00000014720	ENSCATP00000000478	FA complementation group M.	GEN1 Holliday junction 5' flap endonuclease.	0.862
FANCM	WRN	ENSCATP00000014720	ENSCATP00000035398	FA complementation group M.	WRN RecQ like helicase.	0.997
GEN1	BLM	ENSCATP00000000478	ENSCATP00000035511	GEN1 Holliday junction 5' flap endonuclease.	BLM RecQ like helicase.	0.782
GEN1	FANCM	ENSCATP00000000478	ENSCATP00000014720	GEN1 Holliday junction 5' flap endonuclease.	FA complementation group M.	0.862
GEN1	WRN	ENSCATP00000000478	ENSCATP00000035398	GEN1 Holliday junction 5' flap endonuclease.	WRN RecQ like helicase.	0.994
WRN	BLM	ENSCATP00000035398	ENSCATP00000035511	WRN RecQ like helicase.	BLM RecQ like helicase.	0.684
WRN	FANCM	ENSCATP00000035398	ENSCATP00000014720	WRN RecQ like helicase.	FA complementation group M.	0.997
WRN	GEN1	ENSCATP00000035398	ENSCATP00000000478	WRN RecQ like helicase.	GEN1 Holliday junction 5' flap endonuclease.	0.994