STRINGSTRING
ZBTB48 ZBTB48 DCLRE1A DCLRE1A RUVBL2 RUVBL2 RFC1 RFC1 ERCC1 ERCC1 DCLRE1B DCLRE1B RTEL1 RTEL1 HUS1B HUS1B SMC6 SMC6 EXO1 EXO1 WRAP53 WRAP53 TERF2IP TERF2IP TPRKB TPRKB TERT TERT TERF2 TERF2 FBXO4 FBXO4 PARP1 PARP1 MCRS1 MCRS1 LTO1 LTO1 TEP1 TEP1 ATM ATM RAD51C RAD51C NSMCE2 NSMCE2 UPF1 UPF1 SLX4 SLX4 WRN WRN BLM BLM INO80 INO80 SMARCAL1 SMARCAL1 SLX1A SLX1A LOC105599742 LOC105599742 ENSCATP00000036401 ENSCATP00000036401 XRCC5 XRCC5 NFRKB NFRKB SHLD1 SHLD1 PIF1 PIF1 RECQL4 RECQL4 PCNA PCNA SMC5 SMC5 ACTR8 ACTR8 INO80E INO80E XRCC4 XRCC4 BRCA2 BRCA2 TELO2 TELO2 INO80B INO80B NBN NBN RIF1 RIF1 DKC1 DKC1 RAD51 RAD51 LOC105587115 LOC105587115 ERCC4 ERCC4 ENSCATP00000020360 ENSCATP00000020360 DNA2 DNA2 ATR ATR TFPT TFPT HUS1 HUS1 PRKDC PRKDC UCHL5 UCHL5 MAD2L2 MAD2L2 XRCC6 XRCC6 ZNF827 ZNF827 STN1 STN1 XRCC3 XRCC3 NHP2 NHP2 INO80D INO80D CCNE2 CCNE2 PINX1 PINX1 TINF2 TINF2 CCNE1 CCNE1 APEX1 APEX1 NOP10 NOP10 ZNF365 ZNF365 ACTL6A ACTL6A SP100 SP100 GAR1 GAR1 ZSCAN4 ZSCAN4 TERF1 TERF1 PARP3 PARP3 RPA3 RPA3 POT1 POT1 CTC1 CTC1 RUVBL1 RUVBL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ZBTB48Zinc finger and BTB domain containing 48. (688 aa)
DCLRE1ADNA cross-link repair 1A. (1040 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (465 aa)
RFC1Replication factor C subunit 1. (1113 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (323 aa)
DCLRE1BDNA cross-link repair 1B. (532 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1352 aa)
HUS1BCheckpoint protein; Belongs to the HUS1 family. (277 aa)
SMC6Structural maintenance of chromosomes 6. (1092 aa)
EXO1Exonuclease 1. (846 aa)
WRAP53WD repeat containing antisense to TP53. (549 aa)
TERF2IPTERF2 interacting protein. (400 aa)
TPRKBTP53RK binding protein; Belongs to the CGI121/TPRKB family. (213 aa)
TERTTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (1123 aa)
TERF2Telomeric repeat binding factor 2. (542 aa)
FBXO4F-box protein 4. (387 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1014 aa)
MCRS1Microspherule protein 1. (505 aa)
LTO1LTO1 maturation factor of ABCE1. (225 aa)
TEP1Telomerase associated protein 1. (2622 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3073 aa)
RAD51CRAD51 paralog C. (367 aa)
NSMCE2SP-RING-type domain-containing protein. (246 aa)
UPF1UPF1 RNA helicase and ATPase. (1073 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1813 aa)
WRNWRN RecQ like helicase. (1418 aa)
BLMBLM RecQ like helicase. (1416 aa)
INO80INO80 complex ATPase subunit. (1556 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (944 aa)
SLX1AStructure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (304 aa)
LOC105599742Zinc-hook domain-containing protein. (1192 aa)
ENSCATP00000036401Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (262 aa)
XRCC5X-ray repair cross complementing 5. (799 aa)
NFRKBNuclear factor related to kappaB binding protein. (1287 aa)
SHLD1Shieldin complex subunit 1. (254 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (691 aa)
RECQL4RecQ like helicase 4. (1208 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
SMC5SMC_N domain-containing protein. (1201 aa)
ACTR8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
INO80EINO80 complex subunit E. (244 aa)
XRCC4X-ray repair cross complementing 4. (334 aa)
BRCA2BRCA2 DNA repair associated. (3419 aa)
TELO2Telomere maintenance 2. (808 aa)
INO80BPAPA-1 domain-containing protein. (373 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (754 aa)
RIF1Replication timing regulatory factor 1. (2466 aa)
DKC1Dyskerin pseudouridine synthase 1. (514 aa)
RAD51RAD51 recombinase; Belongs to the RecA family. (309 aa)
LOC105587115Ku domain-containing protein. (501 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
ENSCATP00000020360SP-RING-type domain-containing protein. (201 aa)
DNA2DNA replication helicase/nuclease 2. (1056 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2573 aa)
TFPTTCF3 fusion partner. (253 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (280 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4128 aa)
UCHL5Ubiquitin carboxyl-terminal hydrolase. (368 aa)
MAD2L2Mitotic arrest deficient 2 like 2. (212 aa)
XRCC6X-ray repair cross complementing 6. (609 aa)
ZNF827Zinc finger protein 827. (1349 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (368 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (381 aa)
NHP2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (153 aa)
INO80DINO80 complex subunit D. (1027 aa)
CCNE2Cyclin E2; Belongs to the cyclin family. (404 aa)
PINX1PIN2 (TERF1) interacting telomerase inhibitor 1. (322 aa)
TINF2TERF1 interacting nuclear factor 2. (439 aa)
CCNE1Cyclin E1; Belongs to the cyclin family. (410 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
NOP10NOP10 ribonucleoprotein. (64 aa)
ZNF365Zinc finger protein 365. (411 aa)
ACTL6AActin like 6A; Belongs to the actin family. (429 aa)
SP100SP100 nuclear antigen. (863 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (218 aa)
ZSCAN4Zinc finger and SCAN domain containing 4. (433 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (437 aa)
PARP3Poly [ADP-ribose] polymerase. (539 aa)
RPA3Replication protein A3. (121 aa)
POT1Protection of telomeres 1. (634 aa)
CTC1CST telomere replication complex component 1. (1217 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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