Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BLM | BRCA1 | ENSCATP00000035511 | ENSCATP00000044041 | BLM RecQ like helicase. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.871 |
| BLM | BRCA2 | ENSCATP00000035511 | ENSCATP00000015406 | BLM RecQ like helicase. | BRCA2 DNA repair associated. | 0.841 |
| BLM | RAD51 | ENSCATP00000035511 | ENSCATP00000019738 | BLM RecQ like helicase. | RAD51 recombinase; Belongs to the RecA family. | 0.973 |
| BLM | SMC3 | ENSCATP00000035511 | ENSCATP00000043071 | BLM RecQ like helicase. | Structural maintenance of chromosomes 3. | 0.401 |
| BRCA1 | BLM | ENSCATP00000044041 | ENSCATP00000035511 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | BLM RecQ like helicase. | 0.871 |
| BRCA1 | BRCA2 | ENSCATP00000044041 | ENSCATP00000015406 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | BRCA2 DNA repair associated. | 0.997 |
| BRCA1 | RAD51 | ENSCATP00000044041 | ENSCATP00000019738 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | RAD51 recombinase; Belongs to the RecA family. | 0.986 |
| BRCA1 | SMC1B | ENSCATP00000044041 | ENSCATP00000036070 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | Structural maintenance of chromosomes protein. | 0.415 |
| BRCA2 | BLM | ENSCATP00000015406 | ENSCATP00000035511 | BRCA2 DNA repair associated. | BLM RecQ like helicase. | 0.841 |
| BRCA2 | BRCA1 | ENSCATP00000015406 | ENSCATP00000044041 | BRCA2 DNA repair associated. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.997 |
| BRCA2 | LOC105571810 | ENSCATP00000015406 | ENSCATP00000021747 | BRCA2 DNA repair associated. | Cor1 domain-containing protein. | 0.645 |
| BRCA2 | RAD51 | ENSCATP00000015406 | ENSCATP00000019738 | BRCA2 DNA repair associated. | RAD51 recombinase; Belongs to the RecA family. | 0.998 |
| BRCA2 | SMC3 | ENSCATP00000015406 | ENSCATP00000043071 | BRCA2 DNA repair associated. | Structural maintenance of chromosomes 3. | 0.523 |
| BRCA2 | SYCP3 | ENSCATP00000015406 | ENSCATP00000036806 | BRCA2 DNA repair associated. | Cor1 domain-containing protein. | 0.917 |
| LOC105571810 | BRCA2 | ENSCATP00000021747 | ENSCATP00000015406 | Cor1 domain-containing protein. | BRCA2 DNA repair associated. | 0.645 |
| LOC105571810 | REC8 | ENSCATP00000021747 | ENSCATP00000029927 | Cor1 domain-containing protein. | REC8 meiotic recombination protein. | 0.430 |
| LOC105571810 | STAG3 | ENSCATP00000021747 | ENSCATP00000024676 | Cor1 domain-containing protein. | Stromal antigen 3. | 0.437 |
| LOC105571810 | SYCP2 | ENSCATP00000021747 | ENSCATP00000001567 | Cor1 domain-containing protein. | Synaptonemal complex protein 2. | 0.668 |
| RAD51 | BLM | ENSCATP00000019738 | ENSCATP00000035511 | RAD51 recombinase; Belongs to the RecA family. | BLM RecQ like helicase. | 0.973 |
| RAD51 | BRCA1 | ENSCATP00000019738 | ENSCATP00000044041 | RAD51 recombinase; Belongs to the RecA family. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.986 |
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