STRINGSTRING
RAD54L RAD54L POLR2H POLR2H WDR48 WDR48 RPA2 RPA2 TOP3A TOP3A NUCKS1 NUCKS1 TOP1 TOP1 MCM5 MCM5 TEN1 TEN1 STN1 STN1 RBMS1 RBMS1 CRY2 CRY2 SSBP2 SSBP2 FUBP1 FUBP1 ZRANB3 ZRANB3 ENSCATP00000036401 ENSCATP00000036401 MMS22L MMS22L RAD52 RAD52 SMARCAL1 SMARCAL1 LONP1 LONP1 BLM BLM HMCES HMCES LOC105578309 LOC105578309 POLR3C POLR3C MCM9 MCM9 POLA1 POLA1 RAD18 RAD18 MYEF2 MYEF2 TP53 TP53 MCM7 MCM7 SSBP3 SSBP3 TERF2 TERF2 FAM111A FAM111A PCBP3 PCBP3 NOL12 NOL12 NABP1 NABP1 ENSCATP00000030060 ENSCATP00000030060 TERF2IP TERF2IP DHX36 DHX36 POU4F1 POU4F1 SPRTN SPRTN DMC1 DMC1 TDP1 TDP1 XPC XPC RAD23B RAD23B ENSCATP00000025828 ENSCATP00000025828 PCBP2 PCBP2 RECQL RECQL HSF1 HSF1 RAD51AP2 RAD51AP2 FBH1 FBH1 SSBP1 SSBP1 HNRNPU HNRNPU HROB HROB SWSAP1 SWSAP1 POLR2G POLR2G BIVM BIVM ERCC4 ERCC4 NEIL3 NEIL3 RAD51 RAD51 ENSCATP00000019356 ENSCATP00000019356 ENSCATP00000019150 ENSCATP00000019150 HNRNPA2B1 HNRNPA2B1 NUP35 NUP35 MCM10 MCM10 RTF1 RTF1 CDC45 CDC45 TSN TSN WBP11 WBP11 SMC2 SMC2 RAD51B RAD51B RADX RADX TWNK TWNK BRCA2 BRCA2 ENSCATP00000015067 ENSCATP00000015067 MCM4 MCM4 LOC105584991 LOC105584991 IGHMBP2 IGHMBP2 NABP2 NABP2 SMC5 SMC5 RECQL4 RECQL4 SETMAR SETMAR LOC105594295 LOC105594295 CTC1 CTC1 POT1 POT1 DDX11 DDX11 MCM2 MCM2 MCM6 MCM6 ENSCATP00000009666 ENSCATP00000009666 REXO4 REXO4 DHX9 DHX9 SSBP4 SSBP4 RPA3 RPA3 TERF1 TERF1 SMC4 SMC4 TDP2 TDP2 PURB PURB SAMHD1 SAMHD1 SMARCA1 SMARCA1 YBX1 YBX1 FUBP3 FUBP3 ERCC1 ERCC1 PCBP1 PCBP1 LRPPRC LRPPRC MEIOB MEIOB SHOC1 SHOC1 SMC6 SMC6 RBBP8 RBBP8 RAD23A RAD23A RAD51AP1 RAD51AP1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAD54LRAD54 like. (747 aa)
POLR2HRNA polymerase II subunit H. (169 aa)
WDR48WD repeat domain 48. (679 aa)
RPA2Replication protein A2. (270 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (994 aa)
NUCKS1Nuclear casein kinase and cyclin dependent kinase substrate 1. (243 aa)
TOP1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (767 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
TEN1Uncharacterized protein. (123 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (368 aa)
RBMS1RNA binding motif single stranded interacting protein 1. (406 aa)
CRY2Cryptochrome circadian regulator 2. (593 aa)
SSBP2LisH domain-containing protein. (369 aa)
FUBP1Far upstream element binding protein 1. (655 aa)
ZRANB3Zinc finger RANBP2-type containing 3. (1049 aa)
ENSCATP00000036401Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (262 aa)
MMS22LMMS22 like, DNA repair protein. (1243 aa)
RAD52RAD52 homolog, DNA repair protein. (397 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (944 aa)
LONP1Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial promoters and RNA in a single-stranded, site-specific, and strand- specific manner. May regulate mi [...] (961 aa)
BLMBLM RecQ like helicase. (1416 aa)
HMCESAbasic site processing protein HMCES; Sensor of abasic sites in single-stranded DNA (ssDNA) required to preserve genome integrity by promoting error-free repair of abasic sites. Acts as an enzyme that recognizes and binds abasic sites in ssDNA at replication forks and chemically modifies the lesion by forming a covalent cross-link with DNA. The HMCES DNA-protein cross- link is then degraded by the proteasome. Promotes error-free repair of abasic sites by acting as a 'suicide' enzyme that is degraded, thereby protecting abasic sites from translesion synthesis (TLS) polymerases and endon [...] (355 aa)
LOC105578309Ubiquitin-like domain-containing protein. (342 aa)
POLR3CRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (534 aa)
MCM9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1142 aa)
POLA1DNA polymerase. (1469 aa)
RAD18RAD18 E3 ubiquitin protein ligase. (505 aa)
MYEF2Myelin expression factor 2. (600 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (402 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
SSBP3Single stranded DNA binding protein 3. (388 aa)
TERF2Telomeric repeat binding factor 2. (542 aa)
FAM111AFamily with sequence similarity 111 member A. (611 aa)
PCBP3Poly(rC) binding protein 3. (371 aa)
NOL12Uncharacterized protein. (213 aa)
NABP1Nucleic acid binding protein 1. (204 aa)
ENSCATP00000030060Uncharacterized protein. (281 aa)
TERF2IPTERF2 interacting protein. (400 aa)
DHX36DEAH-box helicase 36. (1011 aa)
POU4F1POU domain protein. (389 aa)
SPRTNSprT-like N-terminal domain. (488 aa)
DMC1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (319 aa)
TDP1Tyrosyl-DNA phosphodiesterase 1. (603 aa)
XPCXPC complex subunit, DNA damage recognition and repair factor. (939 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (409 aa)
ENSCATP00000025828Uncharacterized protein. (278 aa)
PCBP2Uncharacterized protein. (366 aa)
RECQLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (649 aa)
HSF1Heat shock transcription factor 1. (532 aa)
RAD51AP2RAD51 associated protein 2. (1159 aa)
FBH1F-box DNA helicase 1. (998 aa)
SSBP1Single stranded DNA binding protein 1. (148 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (825 aa)
HROBChromosome 17 open reading frame 53. (640 aa)
SWSAP1SWIM-type zinc finger 7 associated protein 1. (250 aa)
POLR2GRNA polymerase II subunit G. (244 aa)
BIVMBIVM-ERCC5 readthrough. (1636 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
NEIL3Nei like DNA glycosylase 3. (602 aa)
RAD51RAD51 recombinase; Belongs to the RecA family. (309 aa)
ENSCATP00000019356RPA_C domain-containing protein. (276 aa)
ENSCATP00000019150CSD_1 domain-containing protein. (291 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)
NUP35Nucleoporin 35. (278 aa)
MCM10Minichromosome maintenance 10 replication initiation factor. (877 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (710 aa)
CDC45Cell division cycle 45. (598 aa)
TSNTranslin. (228 aa)
WBP11WW domain binding protein 11. (641 aa)
SMC2Structural maintenance of chromosomes protein. (1197 aa)
RAD51BRAD51 paralog B. (425 aa)
RADXRPA1 related single stranded DNA binding protein, X-linked. (855 aa)
TWNKTwinkle mtDNA helicase. (684 aa)
BRCA2BRCA2 DNA repair associated. (3419 aa)
ENSCATP00000015067Uncharacterized protein. (288 aa)
MCM4DNA helicase; Belongs to the MCM family. (863 aa)
LOC105584991Uncharacterized protein. (308 aa)
IGHMBP2Immunoglobulin mu DNA binding protein 2. (938 aa)
NABP2Nucleic acid binding protein 2. (211 aa)
SMC5SMC_N domain-containing protein. (1201 aa)
RECQL4RecQ like helicase 4. (1208 aa)
SETMARSET domain and mariner transposase fusion gene. (684 aa)
LOC105594295Uncharacterized protein. (226 aa)
CTC1CST telomere replication complex component 1. (1217 aa)
POT1Protection of telomeres 1. (634 aa)
DDX11DEAD/H-box helicase 11. (918 aa)
MCM2DNA helicase; Belongs to the MCM family. (904 aa)
MCM6DNA helicase; Belongs to the MCM family. (821 aa)
ENSCATP00000009666Uncharacterized protein. (121 aa)
REXO4REX4 homolog, 3'-5' exonuclease. (422 aa)
DHX9DExH-box helicase 9. (1275 aa)
SSBP4Single stranded DNA binding protein 4. (385 aa)
RPA3Replication protein A3. (121 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (437 aa)
SMC4Structural maintenance of chromosomes protein. (1287 aa)
TDP2Tyrosyl-DNA phosphodiesterase 2. (388 aa)
PURBPurine rich element binding protein B. (312 aa)
SAMHD1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (637 aa)
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1070 aa)
YBX1CSD_1 domain-containing protein. (324 aa)
FUBP3Far upstream element binding protein 3. (570 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (323 aa)
PCBP1Poly(rC) binding protein 1. (356 aa)
LRPPRCPPR_long domain-containing protein. (1461 aa)
MEIOBMeiosis specific with OB-fold. (471 aa)
SHOC1Shortage in chiasmata 1. (1444 aa)
SMC6Structural maintenance of chromosomes 6. (1092 aa)
RBBP8RB binding protein 8, endonuclease. (905 aa)
RAD23ARAD23 homolog A, nucleotide excision repair protein. (363 aa)
RAD51AP1RAD51 associated protein 1. (352 aa)
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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