Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | DDX3X | ENSCATP00000031524 | ENSCATP00000002462 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | 0.479 |
| AGO2 | FMR1 | ENSCATP00000031524 | ENSCATP00000031010 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Fragile X mental retardation 1. | 0.673 |
| AGO2 | NCBP1 | ENSCATP00000031524 | ENSCATP00000002509 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Nuclear cap binding protein subunit 1. | 0.452 |
| AGO2 | POLR2D | ENSCATP00000031524 | ENSCATP00000026699 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | RNA polymerase II subunit D. | 0.544 |
| AGO2 | POLR2G | ENSCATP00000031524 | ENSCATP00000021453 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | RNA polymerase II subunit G. | 0.463 |
| ALKBH1 | METTL3 | ENSCATP00000000781 | ENSCATP00000022284 | AlkB homolog 1, histone H2A dioxygenase. | Methyltransferase like 3; Belongs to the MT-A70-like family. | 0.483 |
| ATF4 | EIF2AK2 | ENSCATP00000012524 | ENSCATP00000026661 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 alpha kinase 2. | 0.596 |
| ATF4 | EIF2AK3 | ENSCATP00000012524 | ENSCATP00000000691 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 alpha kinase 3. | 0.950 |
| ATF4 | EIF2AK4 | ENSCATP00000012524 | ENSCATP00000042662 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 alpha kinase 4. | 0.590 |
| ATF4 | EIF2S1 | ENSCATP00000012524 | ENSCATP00000043114 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 subunit alpha. | 0.950 |
| ATF4 | PPP1R15A | ENSCATP00000012524 | ENSCATP00000011948 | Activating transcription factor 4. | Protein phosphatase 1 regulatory subunit 15A. | 0.915 |
| BOLL | NCBP1 | ENSCATP00000000992 | ENSCATP00000002509 | Boule homolog, RNA binding protein. | Nuclear cap binding protein subunit 1. | 0.484 |
| BZW1 | BZW2 | ENSCATP00000017257 | ENSCATP00000036215 | Basic leucine zipper and W2 domains 1. | Basic leucine zipper and W2 domains 2. | 0.739 |
| BZW2 | BZW1 | ENSCATP00000036215 | ENSCATP00000017257 | Basic leucine zipper and W2 domains 2. | Basic leucine zipper and W2 domains 1. | 0.739 |
| CSDE1 | DDX3X | ENSCATP00000027187 | ENSCATP00000002462 | Cold shock domain containing E1. | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | 0.419 |
| CSDE1 | PAIP1 | ENSCATP00000027187 | ENSCATP00000037716 | Cold shock domain containing E1. | Poly(A) binding protein interacting protein 1. | 0.604 |
| CTIF | MIF4GD | ENSCATP00000029833 | ENSCATP00000010669 | Cap binding complex dependent translation initiation factor. | MIF4G domain containing. | 0.762 |
| CTIF | NCBP1 | ENSCATP00000029833 | ENSCATP00000002509 | Cap binding complex dependent translation initiation factor. | Nuclear cap binding protein subunit 1. | 0.551 |
| DAZL | DDX3X | ENSCATP00000002002 | ENSCATP00000002462 | Deleted in azoospermia like. | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | 0.400 |
| DAZL | NCBP1 | ENSCATP00000002002 | ENSCATP00000002509 | Deleted in azoospermia like. | Nuclear cap binding protein subunit 1. | 0.484 |
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