23 items (Cercocebus atys) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOOK3	Hook microtubule tethering protein 3. (718 aa)
	FAM193B	Family with sequence similarity 193 member B. (822 aa)
	DCTN1	CAP-Gly domain-containing protein. (1278 aa)
	LMNA	Lamin A/C; Belongs to the intermediate filament family. (728 aa)
	LOC105575979	CS domain-containing protein. (326 aa)
	FHOD1	Formin homology 2 domain containing 1. (1182 aa)
	PCM1	Pericentriolar material 1. (2038 aa)
	SUN2	Sad1 and UNC84 domain containing 2. (728 aa)
	LMNB2	Lamin B2; Belongs to the intermediate filament family. (621 aa)
	DYNC1H1	Dynein cytoplasmic 1 heavy chain 1. (4673 aa)
	SYNE3	Spectrin repeat containing nuclear envelope family member 3. (975 aa)
	FBXW11	F-box and WD repeat domain containing 11. (563 aa)
	SUN1	Sad1 and UNC84 domain containing 1. (932 aa)
	NTN1	Netrin 1. (575 aa)
	TMEM201	Transmembrane protein 201. (667 aa)
	LOC105579729	Nuclear distribution C, dynein complex regulator. (287 aa)
	SYNE2	Spectrin repeat containing nuclear envelope protein 2. (6907 aa)
	CEP120	Centrosomal protein 120. (1026 aa)
	CLMN	Calmin. (1002 aa)
	LMNB1	Lamin B1; Belongs to the intermediate filament family. (586 aa)
	DOCK7	Dedicator of cytokinesis 7; Belongs to the DOCK family. (2098 aa)
	ENSCATP00000034500	Uncharacterized protein. (464 aa)
	SLIT1	Slit guidance ligand 1. (1514 aa)

Your Current Organism:

Cercocebus atys

NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP120	HOOK3	ENSCATP00000009967	ENSCATP00000043227	Centrosomal protein 120.	Hook microtubule tethering protein 3.	0.412
CEP120	SUN2	ENSCATP00000009967	ENSCATP00000038305	Centrosomal protein 120.	Sad1 and UNC84 domain containing 2.	0.411
DCTN1	DYNC1H1	ENSCATP00000006259	ENSCATP00000018362	CAP-Gly domain-containing protein.	Dynein cytoplasmic 1 heavy chain 1.	0.993
DCTN1	PCM1	ENSCATP00000006259	ENSCATP00000024952	CAP-Gly domain-containing protein.	Pericentriolar material 1.	0.485
DYNC1H1	DCTN1	ENSCATP00000018362	ENSCATP00000006259	Dynein cytoplasmic 1 heavy chain 1.	CAP-Gly domain-containing protein.	0.993
DYNC1H1	FAM193B	ENSCATP00000018362	ENSCATP00000039343	Dynein cytoplasmic 1 heavy chain 1.	Family with sequence similarity 193 member B.	0.551
DYNC1H1	LOC105575979	ENSCATP00000018362	ENSCATP00000033274	Dynein cytoplasmic 1 heavy chain 1.	CS domain-containing protein.	0.629
DYNC1H1	LOC105579729	ENSCATP00000018362	ENSCATP00000012049	Dynein cytoplasmic 1 heavy chain 1.	Nuclear distribution C, dynein complex regulator.	0.629
FAM193B	DYNC1H1	ENSCATP00000039343	ENSCATP00000018362	Family with sequence similarity 193 member B.	Dynein cytoplasmic 1 heavy chain 1.	0.551
FHOD1	SYNE2	ENSCATP00000025717	ENSCATP00000010157	Formin homology 2 domain containing 1.	Spectrin repeat containing nuclear envelope protein 2.	0.907
HOOK3	CEP120	ENSCATP00000043227	ENSCATP00000009967	Hook microtubule tethering protein 3.	Centrosomal protein 120.	0.412
HOOK3	PCM1	ENSCATP00000043227	ENSCATP00000024952	Hook microtubule tethering protein 3.	Pericentriolar material 1.	0.469
LMNA	LMNB1	ENSCATP00000019596	ENSCATP00000022648	Lamin A/C; Belongs to the intermediate filament family.	Lamin B1; Belongs to the intermediate filament family.	0.986
LMNA	LMNB2	ENSCATP00000019596	ENSCATP00000019364	Lamin A/C; Belongs to the intermediate filament family.	Lamin B2; Belongs to the intermediate filament family.	0.976
LMNA	SUN1	ENSCATP00000019596	ENSCATP00000002768	Lamin A/C; Belongs to the intermediate filament family.	Sad1 and UNC84 domain containing 1.	0.834
LMNA	SUN2	ENSCATP00000019596	ENSCATP00000038305	Lamin A/C; Belongs to the intermediate filament family.	Sad1 and UNC84 domain containing 2.	0.932
LMNA	SYNE2	ENSCATP00000019596	ENSCATP00000010157	Lamin A/C; Belongs to the intermediate filament family.	Spectrin repeat containing nuclear envelope protein 2.	0.794
LMNB1	LMNA	ENSCATP00000022648	ENSCATP00000019596	Lamin B1; Belongs to the intermediate filament family.	Lamin A/C; Belongs to the intermediate filament family.	0.986
LMNB1	LMNB2	ENSCATP00000022648	ENSCATP00000019364	Lamin B1; Belongs to the intermediate filament family.	Lamin B2; Belongs to the intermediate filament family.	0.985
LMNB1	SUN1	ENSCATP00000022648	ENSCATP00000002768	Lamin B1; Belongs to the intermediate filament family.	Sad1 and UNC84 domain containing 1.	0.769