STRINGSTRING
SMG7 SMG7 APEX1 APEX1 TERF1 TERF1 UPF3A UPF3A POT1 POT1 CTC1 CTC1 SMG5 SMG5 PIF1 PIF1 NABP2 NABP2 TELO2 TELO2 SMG6 SMG6 UPF2 UPF2 TP53BP1 TP53BP1 HNRNPA2B1 HNRNPA2B1 LOC105587115 LOC105587115 TERT TERT ZBTB48 ZBTB48 NCL NCL HMBOX1 HMBOX1 TERF2IP TERF2IP TERF2 TERF2 SMG1 SMG1 HNRNPD HNRNPD UPF1 UPF1 WRN WRN BLM BLM ENSCATP00000036401 ENSCATP00000036401 XRCC5 XRCC5 ZBTB10 ZBTB10 XRCC6 XRCC6 STN1 STN1 TEN1 TEN1 TINF2 TINF2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMG7SMG7 nonsense mediated mRNA decay factor. (1170 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (437 aa)
UPF3AUPF3A regulator of nonsense mediated mRNA decay. (463 aa)
POT1Protection of telomeres 1. (634 aa)
CTC1CST telomere replication complex component 1. (1217 aa)
SMG5SMG5 nonsense mediated mRNA decay factor. (1016 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (691 aa)
NABP2Nucleic acid binding protein 2. (211 aa)
TELO2Telomere maintenance 2. (808 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1419 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1272 aa)
TP53BP1Tumor protein p53 binding protein 1. (1979 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)
LOC105587115Ku domain-containing protein. (501 aa)
TERTTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (1123 aa)
ZBTB48Zinc finger and BTB domain containing 48. (688 aa)
NCLNucleolin. (710 aa)
HMBOX1Homeobox containing 1. (443 aa)
TERF2IPTERF2 interacting protein. (400 aa)
TERF2Telomeric repeat binding factor 2. (542 aa)
SMG1SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3660 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (355 aa)
UPF1UPF1 RNA helicase and ATPase. (1073 aa)
WRNWRN RecQ like helicase. (1418 aa)
BLMBLM RecQ like helicase. (1416 aa)
ENSCATP00000036401Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (262 aa)
XRCC5X-ray repair cross complementing 5. (799 aa)
ZBTB10Zinc finger and BTB domain containing 10. (871 aa)
XRCC6X-ray repair cross complementing 6. (609 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (368 aa)
TEN1Uncharacterized protein. (123 aa)
TINF2TERF1 interacting nuclear factor 2. (439 aa)
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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