(9 nodes) RSC-type complex network (Cercocebus atys)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARID2	AT-rich interaction domain 2. (1836 aa)
	SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (411 aa)
	SMARCA4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1679 aa)
	SMARCD2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (531 aa)
	PHF10	PHD finger protein 10. (410 aa)
	ENSCATP00000009181	HMG box domain-containing protein. (177 aa)
	BRD7	Bromodomain containing 7. (652 aa)
	PBRM1	Polybromo 1. (1725 aa)
	ASH1L	ASH1 like histone lysine methyltransferase. (2968 aa)

Your Current Organism:

Cercocebus atys

NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID2	BRD7	ENSCATP00000034531	ENSCATP00000009126	AT-rich interaction domain 2.	Bromodomain containing 7.	0.987
ARID2	ENSCATP00000009181	ENSCATP00000034531	ENSCATP00000009181	AT-rich interaction domain 2.	HMG box domain-containing protein.	0.971
ARID2	PBRM1	ENSCATP00000034531	ENSCATP00000008236	AT-rich interaction domain 2.	Polybromo 1.	0.998
ARID2	PHF10	ENSCATP00000034531	ENSCATP00000037986	AT-rich interaction domain 2.	PHD finger protein 10.	0.984
ARID2	SMARCA4	ENSCATP00000034531	ENSCATP00000012703	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.990
ARID2	SMARCD2	ENSCATP00000034531	ENSCATP00000040783	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.971
ARID2	SMARCE1	ENSCATP00000034531	ENSCATP00000018958	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.984
BRD7	ARID2	ENSCATP00000009126	ENSCATP00000034531	Bromodomain containing 7.	AT-rich interaction domain 2.	0.987
BRD7	ENSCATP00000009181	ENSCATP00000009126	ENSCATP00000009181	Bromodomain containing 7.	HMG box domain-containing protein.	0.949
BRD7	PBRM1	ENSCATP00000009126	ENSCATP00000008236	Bromodomain containing 7.	Polybromo 1.	0.991
BRD7	PHF10	ENSCATP00000009126	ENSCATP00000037986	Bromodomain containing 7.	PHD finger protein 10.	0.990
BRD7	SMARCA4	ENSCATP00000009126	ENSCATP00000012703	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.984
BRD7	SMARCD2	ENSCATP00000009126	ENSCATP00000040783	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.960
BRD7	SMARCE1	ENSCATP00000009126	ENSCATP00000018958	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.973
ENSCATP00000009181	ARID2	ENSCATP00000009181	ENSCATP00000034531	HMG box domain-containing protein.	AT-rich interaction domain 2.	0.971
ENSCATP00000009181	BRD7	ENSCATP00000009181	ENSCATP00000009126	HMG box domain-containing protein.	Bromodomain containing 7.	0.949
ENSCATP00000009181	PBRM1	ENSCATP00000009181	ENSCATP00000008236	HMG box domain-containing protein.	Polybromo 1.	0.966
ENSCATP00000009181	PHF10	ENSCATP00000009181	ENSCATP00000037986	HMG box domain-containing protein.	PHD finger protein 10.	0.950
ENSCATP00000009181	SMARCA4	ENSCATP00000009181	ENSCATP00000012703	HMG box domain-containing protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.973
ENSCATP00000009181	SMARCD2	ENSCATP00000009181	ENSCATP00000040783	HMG box domain-containing protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.960